Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq24549 131 3e-25 seq18302 113 8e-20 seq10662 113 8e-20 seq23168 105 1e-17 seq12531 98.7 2e-15 seq28317 95.1 2e-14 >seq24549 Length=72154 Score = 131 bits (144), Expect = 3e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || ||||| | || ||||| || || || | || | ||| || || |||||||| Sbjct 58053 ATGCCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTATAGTCA 57994 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | ||||| ||| || || ||||||||||| || || |||||||| ||||| ||| Sbjct 57993 GCAAGAGTTCTTCCATCCTCCAACTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGA 57934 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || |||||||| |||||||| ||||| | || | ||| |||||| ||||| |||| Sbjct 57933 GGAATTCCTTCCTTATCTTGGATTTTTGCCTTGACATTGTCAATAGTGTCGGAGCTCTCA 57874 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || || || | ||||| ||||| || ||||| Sbjct 57873 ACCTCAAGAGTAATTGTCTTCCCAGTCAAGGTTTTCACAAAGATCTGCAT 57824 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 || || ||||||| ||| || |||| ||| | ||| | |||||| || || || || Sbjct 58509 ATTCCTCCTCTCAGTCGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTGTAATCA 58450 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | || || ||| || | || || || ||||||||||| | ||| || || || Sbjct 58449 GCAAGAGTCCTCCCATCCTCAAGCTGCTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGT 58390 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || |||||||| ||||| || || | ||| | ||| ||| || || ||| || Sbjct 58389 GGAATCCCTTCTTTGTCTTGGATCTTTGCTTTCACATTATCAATGGTGTCTGAACTTTCT 58330 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || ||||| || || || || || || ||||| || ||||| Sbjct 58329 ACCTCCAGGGTGATAGTCTTTCCAGTCAGTGTCTTAACAAAGATCTGCAT 58280 >seq18302 Length=24432 Score = 113 bits (124), Expect = 8e-20 Identities = 167/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||| | ||||| || || |||| || | ||||| ||| || Sbjct 6929 AATTTGCATACCACCTCTAAGACGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTT 6988 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || | | || || ||| || | ||| ||||| ||||| || | ||||| || Sbjct 6989 GTAATCTGCCAGGGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTG 7048 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || || || || ||||| || || | ||| | ||| ||||||||| || Sbjct 7049 GTCTGGAGGAATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCAATAGTATCTGA 7108 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || || | ||| || || || ||||| | || || |||||||||||||| Sbjct 7109 ACTCTCGACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACAAATATTTGCAT 7165 Score = 95.1 bits (104), Expect = 2e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190 |||||||| | | ||||| || || || | || | ||| || || || ||||| Sbjct 7392 ATACCACCACGAAGACGAAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAGTCA 7451 Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250 | | |||| ||| || | |||||||||||||| || | ||||| || ||||| Sbjct 7452 GCAAGTGTTCGGCCATCTTCAAGCTGTTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGG 7511 Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310 || || ||||| || ||||| ||||| | ||| | ||| || || || ||| ||| Sbjct 7512 GGGATGCCTTCCTTGTCTTGAATTTTAGCTTTAACATTATCGATGGTGTCAGAACTCTCG 7571 Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || || || || ||||| || ||||| || ||||| Sbjct 7572 ACCTCAAGAGTGATGGTCTTTCCAGTGAGCGTCTTAACAAAGATCTGCAT 7621 Score = 89.7 bits (98), Expect = 9e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 193149 AGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCG 193208 || || ||||| | |||| |||||| ||||| ||||| | | || | ||| Sbjct 6270 AGGACAAGATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGCCCATCC 6329 Query 193209 TCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCT 193268 || | || || ||||| || || | ||||||||||| || || || ||||| |||||| Sbjct 6330 TCAAGCTGCTTACCGGCGAATATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTATCT 6389 Query 193269 TGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTT 193328 ||||| || | ||| | ||| ||||||||| || ||| || || | || || ||| Sbjct 6390 TGTATCTTTGCTTTCACATTGTCAATAGTATCTGAGCTCTCCACCTCCAATGTGATCGTT 6449 Query 193329 TTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || ||||| Sbjct 6450 TTCCCGGTCAGAGTCTTCACGAAGATCTGCAT 6481 >seq10662 Length=13073 Score = 113 bits (124), Expect = 8e-20 Identities = 167/237 (70%), Gaps = 0/237 (0%) Strand=Plus/Plus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||||||||| | ||||| || || |||| || | ||||| ||| || Sbjct 1336 AATTTGCATACCACCTCTAAGACGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTT 1395 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || | | || || ||| || | ||| ||||| ||||| || | ||||| || Sbjct 1396 GTAATCTGCCAGGGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTG 1455 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 || ||||| || || || || ||||| || || | ||| | ||| ||||||||| || Sbjct 1456 GTCTGGAGGAATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCAATAGTATCTGA 1515 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||| || || | ||| || || || ||||| | || || |||||||||||||| Sbjct 1516 ACTCTCGACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACAAATATTTGCAT 1572 Score = 93.3 bits (102), Expect = 8e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 193205 ATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTT 193264 ||| |||| |||||||||||||| || | ||||| || ||||| || || ||||| || Sbjct 1873 ATCTTCTAGCTGTTTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTT 1932 Query 193265 ATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTAT 193324 ||||| || || | ||| | ||| || || || ||| ||| || || ||||| || Sbjct 1933 GTCTTGAATCTTAGCTTTAACATTATCGATGGTGTCAGAACTCTCGACCTCGAGAGTGAT 1992 Query 193325 AGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || ||||| || ||||| || ||||| Sbjct 1993 GGTCTTTCCAGTGAGCGTCTTAACAAAGATCTGCAT 2028 >seq23168 Length=55519 Score = 105 bits (116), Expect = 1e-17 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192 |||||| | | || || || ||||| | || | ||| || || || ||||||| Sbjct 53716 ACCACCACGGAGACGGAGCACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGC 53775 Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252 | || | | ||| || | || |||||||| ||||| |||| ||| || || || || Sbjct 53776 AAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGGG 53835 Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312 || ||||| || ||||| || |||| ||| | ||| || || || ||||||||||| Sbjct 53836 AATCCCTTCCTTGTCTTGGATCTTGGCTTTGACATTGTCGATGGTGTCAGAAGACTCAAC 53895 Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTT 193363 ||||| || || || || || ||||| ||||| || || || ||||| || Sbjct 53896 CTCTAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 53946 >seq12531 Length=12345 Score = 98.7 bits (108), Expect = 2e-15 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 193149 AGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCG 193208 || || ||||| | |||| |||||| ||||| ||||| | | || | ||| Sbjct 11931 AGGACAAGATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGCCCATCC 11990 Query 193209 TCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCT 193268 || | || || ||||| || || | ||||||||||| || || || ||||| |||||| Sbjct 11991 TCAAGCTGCTTACCGGCGAAGATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTATCT 12050 Query 193269 TGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTT 193328 |||||||| | ||| | ||| ||||||||| || ||| || || | || |||||| Sbjct 12051 TGTATTTTTGCTTTCACATTGTCAATAGTATCTGAGCTCTCCACCTCCAATGTGATAGTT 12110 Query 193329 TTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || ||||| Sbjct 12111 TTCCCGGTCAGAGTCTTCACGAAGATCTGCAT 12142 >seq28317 Length=665 Score = 95.1 bits (104), Expect = 2e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 193149 AGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCG 193208 || || ||||| | |||| |||||| ||||| ||||| | | || | ||| Sbjct 366 AGGACAAGATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGCCCATCC 425 Query 193209 TCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCT 193268 || | || || ||||| || || | ||||||||||| || || || ||||| |||||| Sbjct 426 TCAAGCTGCTTACCGGCGAAGATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTATCT 485 Query 193269 TGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTT 193328 |||||||| | ||| | ||| ||||||||| || ||| || || | || || ||| Sbjct 486 TGTATTTTTGCTTTCACATTGTCAATAGTATCTGAGCTCTCCACCTCCAATGTGATNGTT 545 Query 193329 TTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || || || || || || || || ||||| Sbjct 546 TTCCCGGTCAGAGTCTTCACGAAGATCTGCAT 577 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899273475081360