Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq24549 102 1e-16 seq12531 102 1e-16 seq28317 98.7 1e-15 seq18302 98.7 1e-15 seq10662 98.7 1e-15 seq24612 93.3 6e-14 seq26813 89.7 8e-13 seq24416 84.2 3e-11 >seq24549 Length=72154 Score = 102 bits (112), Expect = 1e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | ||||| ||||||||||| |||||||| | || || ||| ||| Sbjct 58052 ATGCAGATCTTTGTGAAAACTTTGACTGGAAAGACTATTACCCTTGAGGTTGAAAGCTCT 58111 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 || | |||| || || || ||||| || || || |||||||| |||||||| || Sbjct 58112 GACACTATTGACAATGTCAAGGCAAAAATTCAGGACAAGGAAGGCATTCCTCCAGATCAG 58171 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || ||||||| ||| || ||||| || || ||| Sbjct 58172 CAGAGGTTGATTTTTGCTGGAAAGCAACTTGAGGAT 58207 Score = 89.7 bits (98), Expect = 8e-13 Identities = 114/157 (73%), Gaps = 0/157 (0%) Strand=Plus/Plus Query 155822 AATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTC 155881 |||||| || ||| | || ||||||||||| || |||||||| || || || || || Sbjct 58507 AATGCAGATCTTTGTGAAGACATTGACTGGGAAGACTATTACCTTGGAGGTGGAGAGCTC 58566 Query 155882 TGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACA 155941 |||| ||| || ||||| || || || ||||| || || || || ||||| || Sbjct 58567 GGATACCATTGATAATGTGAAGGCAAAGATTCAGGATAAGGAGGGTATCCCACCAGACCA 58626 Query 155942 ACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || |||||| ||| ||||||||||| || ||| Sbjct 58627 GCAGAGGCTGATTTTTGCTGGTAAGCAGCTGGAGGAT 58663 >seq12531 Length=12345 Score = 102 bits (112), Expect = 1e-16 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || |||| || |||||||| ||||| || || || || Sbjct 12142 ATGCAGATCTTCGTGAAGACTCTGACCGGGAAAACTATCACATTGGAGGTGGAGAGCTCA 12083 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || |||||| |||||||||||||| ||||| || || ||||| ||| Sbjct 12082 GATACTATTGACAATGTGAAAGCAAAAATACAAGATAAGGAAGGGATTCCACCAGATCAA 12023 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | |||||||||||||| || ||| | || | |||| || ||| Sbjct 12022 CAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAGGATGGGCGCACCCTTGCAGACTACAAT 11963 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 || |||||| | || |||||| Sbjct 11962 ATCCAGAAAGAGTCTACTCTTCAT 11939 >seq28317 Length=665 Score = 98.7 bits (108), Expect = 1e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || |||| || ||||| || ||||| || || || || Sbjct 577 ATGCAGATCTTCGTGAAGACTCTGACCGGGAAAACNATCACATTGGAGGTGGAGAGCTCA 518 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || |||||| |||||||||||||| ||||| || || ||||| ||| Sbjct 517 GATACTATTGACAATGTGAAAGCAAAAATACAAGATAAGGAAGGGATTCCACCAGATCAA 458 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | |||||||||||||| || ||| | || | |||| || ||| Sbjct 457 CAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAGGATGGGCGCACCCTTGCAGACTACAAT 398 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 || |||||| | || |||||| Sbjct 397 ATCCAGAAAGAGTCTACTCTTCAT 374 >seq18302 Length=24432 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| |||| |||||||| || || || ||||| || || ||||| ||| Sbjct 7165 ATGCAAATATTTGTTAAGACATTGACAGGGAAGACAATTACTTTGGAGGTCGAGAGTTCA 7106 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || || ||| || || ||||| || || || || |||||||| || Sbjct 7105 GATACTATTGACAATGTTAAAGCAAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAG 7046 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||| | ||| || ||||| || || ||| || || | ||||||| || Sbjct 7045 CAGAGGCTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACCCTGGCAGATTACAAC 6986 Query 156003 AT 156004 || Sbjct 6985 AT 6984 Score = 93.3 bits (102), Expect = 6e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || || | || || |||| || ||||| || ||||| || || || || Sbjct 6481 ATGCAGATCTTCGTGAAGACTCTGACCGGGAAAACGATCACATTGGAGGTGGAGAGCTCA 6422 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || |||||| || ||||||||||| ||||| || || ||||| ||| Sbjct 6421 GATACTATTGACAATGTGAAAGCAAAGATACAAGATAAGGAAGGGATTCCACCAGATCAA 6362 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || | || | |||||||||||||| || ||| | || | |||| || ||| Sbjct 6361 CAGAGGCTCATATTCGCCGGTAAGCAGCTTGAGGATGGGCGCACCCTTGCAGACTACAAT 6302 Query 156003 ATATCCAAAGAGGCGACGCTTCAT 156026 || |||||| | || |||||| Sbjct 6301 ATCCAGAAAGAGTCTACTCTTCAT 6278 >seq10662 Length=13073 Score = 98.7 bits (108), Expect = 1e-15 Identities = 131/182 (72%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 |||||||||||| |||| |||||||| || || || ||||| || || ||||| ||| Sbjct 1572 ATGCAAATATTTGTTAAGACATTGACAGGGAAGACAATTACTTTGGAGGTCGAGAGTTCA 1513 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || || ||| || || ||||| || || || || |||||||| || Sbjct 1512 GATACTATTGACAATGTTAAAGCAAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAG 1453 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTATAAT 156002 || || |||| | ||| || ||||| || || ||| || || | ||||||| || Sbjct 1452 CAGAGGCTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACCCTGGCAGATTACAAC 1393 Query 156003 AT 156004 || Sbjct 1392 AT 1391 >seq24612 Length=73035 Score = 93.3 bits (102), Expect = 6e-14 Identities = 108/146 (74%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 18155 AAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGTT 18214 || |||||||||||| ||| |||||||| ||||| || || || || || || ||| Sbjct 59404 AAGCACGCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATCAACTCATTCGAGAAAGTT 59463 Query 18215 AACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAAG 18274 || |||||||||| || | ||||| | ||||||||| || |||||| | |||||| Sbjct 59464 AATCCGGGCATTAACCCCCGCTTTTTCAACCAAAATATTGAACAGAAACTTCCGGAAAAG 59523 Query 18275 AATATACCCTCAACGCACGCGAACGC 18300 || || || || || || || || || Sbjct 59524 AAAATCCCTTCTACACAAGCAAAAGC 59549 >seq26813 Length=197329 Score = 89.7 bits (98), Expect = 8e-13 Identities = 115/159 (72%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 |||||||| || ||| | || || | || || || |||||||| ||||| || || Sbjct 97535 AAAATGCAGATCTTTGTGAAGACCCTAACGGGCAAGACTATTACCTTAGAGGTAGAGTCA 97476 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||| | ||| || || || ||| || || || || |||||||| || ||||| Sbjct 97475 TCTGACACCATTGACAATGTCAAGGCTAAGATCCAGGACAAGGAAGGCATTCCACCAGAC 97416 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || || ||||||| || |||||||||||||| ||| Sbjct 97415 CAGCAGAGGTTGATTTTCGCAGGTAAGCAGCTCGAGGAT 97377 >seq24416 Length=70076 Score = 84.2 bits (92), Expect = 3e-11 Identities = 112/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 155823 ATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGATTCT 155882 ||||| || ||| | || || |||||||| || || || || || || || || |||| Sbjct 31816 ATGCAGATTTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTGGAGAGTTCT 31875 Query 155883 GATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAACAA 155942 |||| |||| || || || ||| || || || || || || || || ||||| || Sbjct 31876 GATACTATTGACAATGTCAAGGCTAAGATTCAGGACAAGGAGGGAATCCCGCCAGACCAG 31935 Query 155943 CAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGAT 155978 || || |||| | ||| || ||||||||||||||| Sbjct 31936 CAGAGGCTGATCTTTGCAGGGAAGCAGCTCGAAGAT 31971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731562116246800