Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq10662 113 9e-20 seq24612 105 1e-17 seq18302 104 5e-17 seq29790 98.7 2e-15 seq28317 98.7 2e-15 seq26112 98.7 2e-15 seq12531 98.7 2e-15 seq26813 96.9 7e-15 seq24416 93.3 8e-14 seq24483 89.7 1e-12 >seq10662 Length=13073 Score = 113 bits (124), Expect = 9e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| || | ||| | || | |||||| || | |||||| ||||| || || Sbjct 1571 ATACCACCCCTCAAACGAAGAACAAGATGTAAGGTTGACTCTTTCTGAATATTGTAGTCG 1630 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | | |||| || | ||| ||||||||||||||||| ||||| || || || Sbjct 1631 GCCAGGGTCCTTCCATCCTCAAGTTGCTTACCAGCAAAGATTAACCTCTGCTGGTCTGGA 1690 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || |||||||| || || ||| ||||| || | ||||| || Sbjct 1691 GGAATACCCTCCTTATCTTGGATCTTTGCTTTAACATTGTCAATTGTGTCTGAACTCTCA 1750 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || || || ||||| | ||| || | |||||||||||| Sbjct 1751 ACTTCAAGGGTGATAGTCTTTCCAGTAAGTGTCTTGACAAATATCTGCAT 1800 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||||||||| | || | || | || | ||||| || || ||||| Sbjct 1343 ATACCACCTCTAAGACGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCT 1402 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | | |||| || | ||| || ||||||||||| | ||||| || || || Sbjct 1403 GCCAGGGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGA 1462 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || ||||| || || ||| ||||| |||| |||||| || Sbjct 1463 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCAATAGTATCTGAACTCTCG 1522 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | |||||| || || || || ||||| |||| |||||| ||||| Sbjct 1523 ACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACAAATATTTGCAT 1572 >seq24612 Length=73035 Score = 105 bits (116), Expect = 1e-17 Identities = 111/146 (76%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 49821 AAACATGCAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTT 49880 || || ||||||||| || ||||| ||||| || || || || ||||| |||||| Sbjct 59404 AAGCACGCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATCAACTCATTCGAGAAAGTT 59463 Query 49881 AATCCTGGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAG 49940 ||||| |||||||| || | |||||| | |||||||||||| ||||| | |||||| Sbjct 59464 AATCCGGGCATTAACCCCCGCTTTTTCAACCAAAATATTGAACAGAAACTTCCGGAAAAG 59523 Query 49941 AATATACCCTCGACACACGCAAATGC 49966 || || || || ||||| ||||| || Sbjct 59524 AAAATCCCTTCTACACAAGCAAAAGC 59549 >seq18302 Length=24432 Score = 104 bits (114), Expect = 5e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| || | ||| | || | |||||| || | |||||| ||||| || || Sbjct 7164 ATACCACCCCTCAAACGAAGAACAAGATGTAAGGTTGACTCTTTCTGAATATTGTAGTCG 7223 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | | |||| || | ||| || ||||||||||| || ||||| || || || Sbjct 7224 GCCAGGGTCCTTCCATCCTCAAGTTGCTTGCCAGCAAAGATCAACCTCTGCTGGTCTGGA 7283 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || |||||||| || || ||| ||||| || | ||||| || Sbjct 7284 GGAATACCCTCCTTATCTTGAATCTTTGCTTTGACATTGTCAATTGTGTCTGAACTCTCA 7343 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||| || || || || || ||||| | ||| || | |||||||||||| Sbjct 7344 ACTTCAAGGGTGATAGTCTTTCCAGTAAGTGTCTTGACAAATATCTGCAT 7393 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || || ||||| || || ||||| | ||| | ||| || ||| ||||| || Sbjct 6480 ATACCTCCCCTCAGACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCT 6539 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | ||| | |||| || | |||||||||||||||||| || | ||| || || || Sbjct 6540 GCAAGTGTCCTGCCATCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGG 6599 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || ||||| || || ||| ||||| || | |||||| || || Sbjct 6600 GGAATACCCTCCTTGTCTTGAATCTTTGCTTTAACATTGTCAATGGTATCTGAGGACTCC 6659 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | || || || || ||||| | || || | || |||||||| Sbjct 6660 ACCTCCAATGTGATAGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCAT 6709 Score = 100 bits (110), Expect = 6e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||||||||||||||| | || | || | || | ||||| || || ||||| Sbjct 6936 ATACCACCTCTAAGACGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCT 6995 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | | |||| || | ||| || ||||||||||| | ||||| || || || Sbjct 6996 GCCAGGGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAGCCTCTGCTGGTCTGGA 7055 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || ||||| || || ||| ||||| |||| |||||| || Sbjct 7056 GGAATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCAATAGTATCTGAACTCTCG 7115 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | |||||| || || || || ||||| |||| |||||| ||||| Sbjct 7116 ACCTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACAAATATTTGCAT 7165 Score = 89.7 bits (98), Expect = 1e-12 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 192333 ATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTG 192392 ||| | ||||| |||||| |||||| || || | | || || |||| || | || Sbjct 6278 ATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGCCCATCCTCAAGCTG 6337 Query 192393 TTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTT 192452 ||||| || || || | ||||||||||| ||||| || ||||| ||||||||||| || Sbjct 6338 CTTACCGGCGAATATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTATCTTGTATCTT 6397 Query 192453 ATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 192512 ||| ||||| |||| |||||| || || || | || || ||||| || || Sbjct 6398 TGCTTTCACATTGTCAATAGTATCTGAGCTCTCCACCTCCAATGTGATCGTTTTCCCGGT 6457 Query 192513 TAATGTTTTAATAAATATCTGCAT 192536 | || || | || |||||||| Sbjct 6458 CAGAGTCTTCACGAAGATCTGCAT 6481 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 || || || || | ||| || || ||||| | ||| | ||| || ||| ||||| || Sbjct 6708 ATCCCTCCCCTCAAACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCT 6767 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 | | || | |||| || | |||||| ||||||||||| || | ||| || || || Sbjct 6768 GCAAGAGTCCTCCCATCCTCAAGTTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGG 6827 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || || || || ||||| || || ||| || || || | |||||| ||| Sbjct 6828 GGAATACCCTCCTTGTCTTGAATCTTTGCTTTGACGTTGTCAATGGTATCTGAACTTTCA 6887 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || | ||||| || |||||||| || || || | ||| || ||||| Sbjct 6888 ACCTCCAATGTAATTGTCTTACCAGTCAACGTCTTGACAAAAATTTGCAT 6937 >seq29790 Length=1029 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384 || || | ||| ||||| ||||| |||||||||||| | ||||| || |||| Sbjct 561 AAGACAAGATGCAAAGTCAATTCTTTTTGGATATTATAATCCGGCAATGTACGCCCATCT 620 Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444 || | | ||||||||||||||| | | | | || || |||| || ||||| || || Sbjct 621 TCAAGCTTTTTACCAGCAAAGATCAGTTGCGGCTGGTCCAGTGGAATACCTTCCTTGTCC 680 Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504 || |||||| || ||||| | || | ||| ||||| ||||| || || ||||| Sbjct 681 TGAATTTTAGCCTTGACATTGTTGATGGTATCGTTGGATTCAACTTCAAGGGTTATGGTC 740 Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCATTTTAT 192541 || || ||| |||||| | || ||||| || |||| Sbjct 741 TTCCCTCTTAGTGTTTTCACGAAGATCTGTATCTTAT 777 >seq28317 Length=665 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 192333 ATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTG 192392 ||| | ||||| |||||| |||||| || || | | || || |||| || | || Sbjct 374 ATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGCCCATCCTCAAGCTG 433 Query 192393 TTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTT 192452 ||||| || ||||| | ||||||||||| ||||| || ||||| |||||||||||||| Sbjct 434 CTTACCGGCGAAGATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTATCTTGTATTTT 493 Query 192453 ATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 192512 ||| ||||| |||| |||||| || || || | || || ||||| || || Sbjct 494 TGCTTTCACATTGTCAATAGTATCTGAGCTCTCCACCTCCAATGTGATNGTTTTCCCGGT 553 Query 192513 TAATGTTTTAATAAATATCTGCAT 192536 | || || | || |||||||| Sbjct 554 CAGAGTCTTCACGAAGATCTGCAT 577 >seq26112 Length=112099 Score = 98.7 bits (108), Expect = 2e-15 Identities = 152/217 (70%), Gaps = 0/217 (0%) Strand=Plus/Plus Query 192325 AATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCA 192384 || || | ||| ||||| ||||| |||||||||||| | ||||| || |||| Sbjct 86622 AAGACAAGATGCAAAGTCAATTCTTTTTGGATATTATAATCCGGCAATGTACGCCCATCT 86681 Query 192385 TCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCT 192444 || | | ||||||||||||||| | | | | || || |||| || ||||| || || Sbjct 86682 TCAAGCTTTTTACCAGCAAAGATCAGTTGCGGCTGGTCCAGTGGAATACCTTCCTTGTCC 86741 Query 192445 TGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTT 192504 || |||||| || ||||| | || | ||| ||||| ||||| || || ||||| Sbjct 86742 TGAATTTTAGCCTTGACATTGTTGATGGTATCGTTGGATTCAACTTCAAGGGTTATGGTC 86801 Query 192505 TTACCAGTTAATGTTTTAATAAATATCTGCATTTTAT 192541 || || ||| |||||| | || ||||| || |||| Sbjct 86802 TTCCCTCTTAGTGTTTTCACGAAGATCTGTATCTTAT 86838 >seq12531 Length=12345 Score = 98.7 bits (108), Expect = 2e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 192333 ATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTG 192392 ||| | ||||| |||||| |||||| || || | | || || |||| || | || Sbjct 11939 ATGAAGAGTAGACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGCCCATCCTCAAGCTG 11998 Query 192393 TTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTT 192452 ||||| || ||||| | ||||||||||| ||||| || ||||| |||||||||||||| Sbjct 11999 CTTACCGGCGAAGATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTATCTTGTATTTT 12058 Query 192453 ATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGT 192512 ||| ||||| |||| |||||| || || || | || || ||||| || || Sbjct 12059 TGCTTTCACATTGTCAATAGTATCTGAGCTCTCCACCTCCAATGTGATAGTTTTCCCGGT 12118 Query 192513 TAATGTTTTAATAAATATCTGCAT 192536 | || || | || |||||||| Sbjct 12119 CAGAGTCTTCACGAAGATCTGCAT 12142 >seq26813 Length=197329 Score = 96.9 bits (106), Expect = 7e-15 Identities = 133/186 (72%), Gaps = 0/186 (0%) Strand=Plus/Plus Query 192354 GATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCT 192413 ||| || || |||| || ||||||| |||| || | || ||||| || || || || || Sbjct 97350 GATGTTGTAGTCAGCTAGTGTTCGTCCATCCTCGAGCTGCTTACCTGCGAAAATCAACCT 97409 Query 192414 CTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGA 192473 ||| || || ||||| || ||||| || || || || ||| || ||||| || | Sbjct 97410 CTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGGATCTTAGCCTTGACATTGTCAATGGT 97469 Query 192474 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || || ||||| |||| ||||| || || || |||| || || | ||| ||||| Sbjct 97470 GTCAGATGACTCTACCTCTAAGGTAATAGTCTTGCCCGTTAGGGTCTTCACAAAGATCTG 97529 Query 192534 CATTTT 192539 |||||| Sbjct 97530 CATTTT 97535 >seq24416 Length=70076 Score = 93.3 bits (102), Expect = 8e-14 Identities = 131/183 (72%), Gaps = 1/183 (1%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 ||||| ||||||| | ||||| | |||| ||||| || ||||||||||| || || || Sbjct 31769 ATATTGTAATCAGCCAGTGTTCTTCCATCTTCCAACTGCTTACCAGCAAAAATCAACCTT 31710 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 || || || ||||| || |||||||| || || || || || ||||| || | Sbjct 31709 TGCTGGTCTGGTGGGATACCTTCTTTGTCCTGAATCTTGGCCTTAACATTGTCAATGGTG 31650 Query 192475 TC-TGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTG 192533 || || ||| ||||| || ||||| || || ||||| || || || | ||| || || Sbjct 31649 TCGAGAACTTTCCACTTCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACAAAGATTTG 31590 Query 192534 CAT 192536 ||| Sbjct 31589 CAT 31587 >seq24483 Length=75877 Score = 89.7 bits (98), Expect = 1e-12 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || ||||||| || ||||| |||| ||||| ||||| |||||||| || | |||| Sbjct 23976 ATGTTGTAATCAGCCAAAGTTCGACCATCTTCCAACTGTTTCCCAGCAAATATCAGTCTC 24035 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTG 192446 || |||||||| ||||| ||||||||||| || Sbjct 24036 TGCTGATCAGGAGGTATGCCTTCTTTATCCTG 24067 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984052737833550