Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq24612 116 5e-20 >seq24612 Length=73035 Score = 116 bits (128), Expect = 5e-20 Identities = 191/273 (70%), Gaps = 2/273 (1%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 || ||||| ||||| |||||||| ||||| || || || || | | |||| || |||||| Sbjct 59707 GAATGGATATTCTCAATGGCGATTTGGAATCCATAGAAAGCACGCGCCTCAGCAACTTGG 59766 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || |||||||||| || || |||||||| ||||||||||| ||| || ||| Sbjct 59767 ACATCTTTCATGAACCTTCCAGCGAGGTTCTCTAAAACGATGCCGTCTGAGGCAGCAAAA 59826 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || || || || |||| || || | || || | || |||| | |||| Sbjct 59827 AACGCAAGCACATGAGTGATGAAATGCCTTTCACCGGATGTTAGGTTTTCCCAAT-GACG 59885 Query 869813 -GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTA 869871 || ||||| || || || || || || ||||||| || ||| || || ||||| Sbjct 59886 AGTATCGGCAGATAGATCGACTTCTTCTGCCGTCCAGAAAGATGCCATAGCTTTCTTGTA 59945 Query 869872 CATCTCCCATACTTGCTGGTAGCGGATAGGGAA 869904 ||| ||||| | ||| |||| | || ||||| Sbjct 59946 CATTTCCCAAATTTGTGGGTACTGAATTGGGAA 59978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104359422992741