Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq24416 96.9 3e-15 seq23505 89.7 4e-13 seq22151 87.8 1e-12 >seq24416 Length=70076 Score = 96.9 bits (106), Expect = 3e-15 Identities = 159/228 (70%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA- 110331 |||||||| ||||| || || || || ||||| || |||||| | ||| ||| | Sbjct 31587 ATGCAAATCTTTGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAAGTGGAAAGTTCT 31646 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||| || | | | | || || |||||| ||||||||||| | || || || Sbjct 31647 CGACACCATTGACAATGTTAAGGCCAAGATTCAGGACAAAGAAGGTATCCCACCAGACCA 31706 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 ||||| | |||| ||| ||||| ||| |||| |||| |||||| |||| |||||||| Sbjct 31707 GCAAAGGTTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGAACACTGGCTGATTACAA 31766 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||| || ||||| || | || | ||||| || || | ||||| Sbjct 31767 TATTCAGAAGGAATCGACCCTTCATCTTGTGTTGAGGCTCAGGGGGGG 31814 Score = 95.1 bits (104), Expect = 1e-14 Identities = 150/212 (71%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA--GC-CT 110329 ||||| || || || || ||| | || ||||| ||||| || | || ||| || || Sbjct 35667 ATGCAGATTTTCGTGAAGACTCTTACTGGCAAGACCATCACTTTGGAGGTGGAAAGCTCT 35726 Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389 ||| || ||| | | || || |||||| ||||| || ||| | ||| ||| Sbjct 35727 GAC---ACCATCGACAACGTGAAGGCCAAGATTCAGGACAAGGAGGGCATTCCCCCAGAT 35783 Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449 ||||||||||| |||| ||| ||||| ||| |||| |||| || || |||| |||||| Sbjct 35784 CAACAAAGACTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGGACTCTGGCTGATTAC 35843 Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGT 110481 ||||| || || ||||| || | ||| |||| Sbjct 35844 AACATCCAGAAGGAATCAACCCTTCACTTGGT 35875 >seq23505 Length=59109 Score = 89.7 bits (98), Expect = 4e-13 Identities = 157/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || || || ||||| || ||||||||| | || ||| | Sbjct 2896 ATGCAAATCTTTGTGAAGACCTTCACCGGGAAGACCATTACCCTGGAGGTTGAGAGCTCC 2837 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || ||| | | || || ||||| ||||| || || | || || || Sbjct 2836 GACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCAG 2777 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 || || | || | ||| ||||| ||||| ||||||| | | || |||||||||||||| Sbjct 2776 CAGAGGTTGATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGGCGGATTACAAC 2717 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 || ||||| || || || | ||| ||||| | || ||| | || |||| Sbjct 2716 ATCCAAAAGGAGTCGACCCTTCACTTGGTGCTGAGGCTGAGGGGAGGAA 2668 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110272 AATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGA 110331 |||||| || |||||||| || | ||||| || ||||| ||| | || ||| Sbjct 2669 AATGCAGATTTTTGTCAAGACCCTCACCGGGAAGACCATCACCTTGGAGGTTGAGAGCTC 2610 Query 110332 CGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCA 110391 ||| || ||| | | || || ||||| ||||| || || | || || || Sbjct 2609 CGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGACCA 2550 Query 110392 ACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAA 110451 || || | || | ||| ||||| ||||| ||||||| | | || ||||||||||||| Sbjct 2549 GCAGAGGTTGATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGGCGGATTACAA 2490 Query 110452 CATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAA 110501 ||| ||||| || || || | ||| ||||| | || ||| | || |||| Sbjct 2489 CATCCAAAAGGAGTCGACCCTTCACTTGGTGCTGAGGCTGAGGGGAGGAA 2440 >seq22151 Length=46047 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 110366 GACAAAGAAGGCGTGCCCGTGGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAG 110425 ||||||||||| | || || || || ||||| |||| ||| || |||||| |||| Sbjct 13859 GACAAAGAAGGGATACCTCCTGACCAGCAGAGACTAATTTTTGCTGGAAAACAGTTGGAA 13918 Query 110426 GATGCCAGAACAATGGCGGATTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTA 110485 |||| |||| |||| ||||||||||| || |||||||| || | ||| |||| || Sbjct 13919 GATGGTCGAACTCTGGCTGATTACAACATCCAGAAAGAATCAACACTTCACCTGGTTTTG 13978 Query 110486 AGACTGCGAGGGGGAA 110501 || ||| | || |||| Sbjct 13979 AGGCTGAGGGGAGGAA 13994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412671167763389