Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq24416 102 6e-17 seq23505 87.8 1e-12 seq10662 82.4 6e-11 >seq24416 Length=70076 Score = 102 bits (112), Expect = 6e-17 Identities = 145/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||||||||| || || || || |||||| |||| | || ||| | Sbjct 35895 ATGCAGATTTTTGTCAAGACGTTGACTGGGAAAACCGTTACTCTGGAGGTGGAAAGTTCT 35954 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | | || || |||||| || || |||||| | ||| || ||| Sbjct 35955 GATACTATTGACAATGTGAAGGCTAAGATTCAAGACAAGGAAGGCATTCCCCCAGACCAG 36014 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 |||||||| || | || || || |||||||| || | | || |||| ||||||||| Sbjct 36015 CAGAGACTGATCTTCGCAGGGAAGCAGCTGGAAGATGGAAGGACTCTGGCAGACTACAAC 36074 Query 107736 ATTCAAAAGGAGTCTACGTTGCAC 107759 || ||||||||||| || |||||| Sbjct 36075 ATCCAAAAGGAGTCAACTTTGCAC 36098 Score = 93.3 bits (102), Expect = 3e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| ||||||||||| ||||| || || || ||||| || | || |||| | Sbjct 31816 ATGCAGATTTTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAGGTGGAGAGTTCT 31875 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 |||||| | | | | || || |||||| || || || || | || || ||| Sbjct 31876 GATACTATTGACAATGTCAAGGCTAAGATTCAGGACAAGGAGGGAATCCCGCCAGACCAG 31935 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||| || || | ||| || || ||||| || || | | || |||||||||||||| Sbjct 31936 CAGAGGCTGATCTTTGCAGGGAAGCAGCTCGAAGATGGTAGGACTCTGGCGGACTACAAC 31995 Query 107736 ATTCAAAAGGAGTCTACGTTGCAC 107759 || ||||||||||| || |||||| Sbjct 31996 ATCCAAAAGGAGTCCACTTTGCAC 32019 >seq23505 Length=59109 Score = 87.8 bits (96), Expect = 1e-12 Identities = 159/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTGG 107614 |||||||| ||||| || || || || || || ||||||||| | || ||| ||| Sbjct 2896 ATGCAAATCTTTGTGAAGACCTTCACCGGGAAGACCATTACCCTGGAGGTTGAGAGCTC- 2838 Query 107615 CGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCA 107674 ||| || ||| | | || || ||||| || || || || | || || || Sbjct 2837 CGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCACCAGACCA 2778 Query 107675 GCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAA 107734 |||||| | || | ||| ||||| ||||| ||||| | | || ||||||| ||||| Sbjct 2777 GCAGAGGTTGATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGGCGGATTACAA 2718 Query 107735 CATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 ||| ||||||||||| || | ||| ||||| |||| || | || |||| Sbjct 2717 CATCCAAAAGGAGTCGACCCTTCACTTGGTGCTGAGGCTGAGGGGAGGAA 2668 Score = 86.0 bits (94), Expect = 5e-12 Identities = 159/231 (69%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 107555 AATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG-GCTG 107613 |||||| ||||||||||| || | || || || ||||| ||| | || ||| ||| Sbjct 2669 AATGCAGATTTTTGTCAAGACCCTCACCGGGAAGACCATCACCTTGGAGGTTGAGAGCTC 2610 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 ||| || ||| | | || || ||||| || || || || | || || | Sbjct 2609 -CGACACCATCGACAATGTCAAGGCCAAGATCCAGGACAAGGAGGGAATCCCGCCAGACC 2551 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 ||||||| | || | ||| ||||| ||||| ||||| | | || ||||||| |||| Sbjct 2550 AGCAGAGGTTGATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGGCGGATTACA 2491 Query 107734 ACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGGAA 107784 |||| ||||||||||| || | ||| ||||| |||| || | || |||| Sbjct 2490 ACATCCAAAAGGAGTCGACCCTTCACTTGGTGCTGAGGCTGAGGGGAGGAA 2440 >seq10662 Length=13073 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 107550 TTTAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAG 107609 ||| | ||||| || ||||| || || | || || || ||||| || |||| ||| Sbjct 2034 TTTCAGATGCAGATCTTTGTTAAGACGCTCACTGGAAAGACCATCACTCTCGAGGTCGAG 1975 Query 107610 GCTGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTG 107669 | || || ||| | || ||| |||||| || || |||||| | ||| Sbjct 1974 AGTTCTGACACCATCGATAATGTTAAAGCTAAGATTCAAGACAAGGAAGGCATCCCCCCT 1915 Query 107670 GATCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGAC 107729 || |||||||| || || | ||| || |||||||| || || | | |||| | || ||| Sbjct 1914 GACCAGCAGAGGCTGATCTTTGCCGGAAAACAGCTAGAAGATGGCCGAACACTTGCTGAC 1855 Query 107730 TACAACATTCAAAAGGAGTCTAC 107752 |||||||| ||||||||||| || Sbjct 1854 TACAACATCCAAAAGGAGTCCAC 1832 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398712132812497