Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq29790 89.7 8e-13 seq26112 89.7 8e-13 seq24549 87.8 3e-12 seq24416 87.8 3e-12 >seq29790 Length=1029 Score = 89.7 bits (98), Expect = 8e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 146034 CAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGAT 146093 || || ||| | |||||| ||| ||| || || || || |||| || ||| |||||| Sbjct 769 CAGATCTTCGTGAAAACACTAAGAGGGAAGACCATAACCCTTGAAGTTGAATCCAACGAT 710 Query 146094 ACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAA 146153 || || | ||||| || |||||| || || ||||| ||||||| || || | Sbjct 709 ACCATCAACAATGTCAAGGCTAAAATTCAGGACAAGGAAGGTATTCCACTGGACCAGCCG 650 Query 146154 AGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATA 146213 ||| || ||||| |||||| | | || ||| | || || | ||||||||||| Sbjct 649 CAACTGATCTTTGCTGGTAAAAAGCTTGAAGATGGGCGTACATTGCCGGATTATAATATC 590 Query 146214 CAAAAAGAATCGACTATCCATTTAGTATT 146242 |||||||||| |||| | ||| | || || Sbjct 589 CAAAAAGAATTGACTTTGCATCTTGTCTT 561 >seq26112 Length=112099 Score = 89.7 bits (98), Expect = 8e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 146034 CAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACGAT 146093 || || ||| | |||||| ||| ||| || || || || |||| || ||| |||||| Sbjct 86830 CAGATCTTCGTGAAAACACTAAGAGGGAAGACCATAACCCTTGAAGTTGAATCCAACGAT 86771 Query 146094 ACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAACAA 146153 || || | ||||| || |||||| || || ||||| ||||||| || || | Sbjct 86770 ACCATCAACAATGTCAAGGCTAAAATTCAGGACAAGGAAGGTATTCCACTGGACCAGCCG 86711 Query 146154 AGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATATA 146213 ||| || ||||| |||||| | | || ||| | || || | ||||||||||| Sbjct 86710 CAACTGATCTTTGCTGGTAAAAAGCTTGAAGATGGGCGTACATTGCCGGATTATAATATC 86651 Query 146214 CAAAAAGAATCGACTATCCATTTAGTATT 146242 |||||||||| |||| | ||| | || || Sbjct 86650 CAAAAAGAATTGACTTTGCATCTTGTCTT 86622 >seq24549 Length=72154 Score = 87.8 bits (96), Expect = 3e-12 Identities = 156/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| || || ||||| || ||||| |||| || ||| | Sbjct 58053 TGCAGATCTTTGTGAAAACTTTGACTGGAAAGACTATTACCCTTGAGGTTGAAAGCTCTG 58112 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | |||||| | ||||| || ||||| || || ||||||||||| || ||||| | Sbjct 58113 ACACTATTGACAATGTCAAGGCAAAAATTCAGGACAAGGAAGGCATTCCTCCAGATCAGC 58172 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || | |||||||| || || ||| | || ||| | | || | | || || |||| Sbjct 58173 AGAGGTTGATTTTTGCTGGAAAGCAACTTGAGGATGGTCGTACCCTTGCTGACTACAATA 58232 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || |||||||| ||| | ||| | || | || |||| || |||| Sbjct 58233 TTCAGAAAGAATCCACTCTTCATCTGGTGCTGCGCCTAAGGGGTGGTA 58280 >seq24416 Length=70076 Score = 87.8 bits (96), Expect = 3e-12 Identities = 146/211 (69%), Gaps = 0/211 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | ||||| | ||||||||||| || ||| |||| || ||| | Sbjct 35440 TGCAGATCTTTGTGAAAACCCTCACAGGAAAAACCATCACTCTTGAGGTGGAAAGCTCTG 35499 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | || || ||| || || || || || ||||| || || || || | Sbjct 35500 ACACCATTGACAACGTGAAAGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAGC 35559 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 ||||||| |||||||| ||||| || || || ||| || || | | || || |||| Sbjct 35560 AAAGACTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGGACTCTCGCTGACTACAATA 35619 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATT 146242 | || |||||||||||| | ||| | || || Sbjct 35620 TTCAGAAAGAATCGACTCTTCATCTTGTGTT 35650 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 785833527319160