Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq18302 122 6e-23 seq24549 111 1e-19 seq24416 111 1e-19 seq23168 111 1e-19 seq26813 93.3 3e-14 seq12531 87.8 1e-12 seq23505 82.4 5e-11 >seq18302 Length=24432 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || |||| ||| ||||||||||| |||||| ||| || || ||||| || || | Sbjct 6482 ACCTCCCCTCAGACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTGC 6541 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| | | || || | |||||| || ||||| |||||||||||||| ||| | || Sbjct 6542 AAGTGTCCTGCCATCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGG 6601 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| || ||||| ||| || || || ||||| ||| | ||| || || |||| Sbjct 6602 AATACCCTCCTTGTCTTGAATCTT-TGCTTTAACATTGTCAATGGTATCTGAGGACTCCA 6660 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | || || || ||||||||||| Sbjct 6661 CCTCCAATGTGATAGTCTTCCCAGTCAGGGTCTTCACGAAGATCTGCAT 6709 Score = 114 bits (126), Expect = 8e-21 Identities = 167/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||||||| ||||||||||| |||||| ||| || || ||||| || || | Sbjct 6711 CCTCCCCTCAAACGCAACACCAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTGCA 6770 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || || | ||||||||| ||||| |||||||||||||| ||| | || Sbjct 6771 AGAGTCCTCCCATCCTCAAGTTGTTTTCCAGCAAAGATCAAACGCTGCTGGTCTGGGGGA 6830 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TTC 33698 | ||| || ||||| ||| || || || || | ||| | ||| || ||| ||| Sbjct 6831 ATACCCTCCTTGTCTTGAATCTT-TGCTTTGACGTTGTCAATGGTATC---TGAACTTTC 6886 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | || || || ||||| || ||||| || ||||| || |||||| Sbjct 6887 AACCTCCAATGTAATTGTCTTACCAGTCAACGTCTTGACAAAAATTTGCATA 6938 Score = 91.5 bits (100), Expect = 1e-13 Identities = 144/204 (71%), Gaps = 2/204 (1%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || || ||| ||| ||||| |||||||| || | ||||| || | || || | ||| Sbjct 7419 TGAAGGGTGGACTCCTTTTGGATGTTGTAGTCAGCAAGTGTTCGGCCATCTTCAAGCTGT 7478 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 ||||||||||| |||| | |||||| || | || | ||||| ||||| |||||| Sbjct 7479 TTTCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGGATGCCTTCCTTGTCTTGAATTTT- 7537 Query 33667 TGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGT 33725 | || ||||| || | |||||| || || |||| ||||| || || || || Sbjct 7538 AGCTTTAACATTATCGATGGTGTCAGAACTCTCGACCTCAAGAGTGATGGTCTTTCCAGT 7597 Query 33726 TAACGTTTTTACAAAGATCTGCAT 33749 | ||| || |||||||||||||| Sbjct 7598 GAGCGTCTTAACAAAGATCTGCAT 7621 >seq24549 Length=72154 Score = 111 bits (122), Expect = 1e-19 Identities = 166/232 (72%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| || | || | ||||| ||| |||||| ||||| || || ||||| || | Sbjct 58279 ACCACCCCTTAGGCGCAGCACCAGATGAAGAGTGGATTCTTTCTGAATATTGTAGTCAGC 58220 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || | ||| ||||| ||||||||||| | |||||||||| | || Sbjct 58219 AAGGGTACGACCATCCTCAAGTTGCTTTCCAGCAAAAATCAACCTCTGCTGATCTGGAGG 58160 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC---GCTTGATT 33697 | ||||| ||||| |||||| || | |||| ||| | ||||| ||| || Sbjct 58159 AATGCCTTCCTTGTCCTGAATTTT-TGCCTTGACATTGTCAATAGTGTCAGAGCT---TT 58104 Query 33698 CCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || |||| || || || || || || || ||||| |||||||||||||| Sbjct 58103 CAACCTCAAGGGTAATAGTCTTTCCAGTCAAAGTTTTCACAAAGATCTGCAT 58052 Score = 105 bits (116), Expect = 4e-18 Identities = 165/232 (71%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || ||||||| || | ||||||||| || ||| |||||| || ||||||||||| | Sbjct 58506 CCTCCTCTCAGTCGGAGCACCAAATGGAGTGTGGACTCTTTCTGGATGTTGTAATCAGCA 58447 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | || || | || || || |||||||| ||||||||||| ||| | || Sbjct 58446 AGAGTCCTCCCATCCTCAAGCTGCTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGA 58387 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TTC 33698 | ||||||||||| || || || || |||| || | |||||| ||| ||| Sbjct 58386 ATCCCTTCTTTGTCTTGGATCTT-TGCTTTCACATTATCAATGGTGTC---TGAACTTTC 58331 Query 33699 CACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || || | ||||| || || || || | || || ||||||||||||||| Sbjct 58330 TACCTCCAGGGTGATAGTCTTTCCAGTCAGTGTCTTAACAAAGATCTGCATA 58279 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | || ||| | || | || || ||| ||| ||||| ||||| || || | Sbjct 58050 CCACCACGCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTTTGGATGTTATAGTCAGCA 57991 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || ||||| ||||||||||| || ||||| | |||||||||| | || Sbjct 57990 AGAGTTCTTCCATCCTCCAACTGTTTTCCGGCGAAGATCAATCTCTGCTGATCTGGAGGA 57931 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| || || ||||| || | |||| ||| | |||||| || || Sbjct 57930 ATTCCTTCCTTATCTTGGATTTT-TGCCTTGACATTGTCAATAGTGTCGGAGCTCTCAAC 57872 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || || || || || || ||||| |||||||||||||| Sbjct 57871 CTCAAGAGTAATTGTCTTCCCAGTCAAGGTTTTCACAAAGATCTGCAT 57824 >seq24416 Length=70076 Score = 111 bits (122), Expect = 1e-19 Identities = 163/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||||| || ||||| ||| || || ||||||||||| | Sbjct 31276 CCACCACGAAGACGAAGGACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAATCTGCA 31217 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| || | ||| ||||| |||||||||| | |||||| ||| | || Sbjct 31216 AGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGA 31157 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| || || | || ||||| ||| | ||||||| |||||| Sbjct 31156 ATGCCTTCCTTGTCCTGGATCTT-GGCTTTAACATTGTCAATGGTGTCGGAGCTTTCCAC 31098 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | ||||| |||||||||||||| Sbjct 31097 CTCAAGGGTGATGGTCTTTCCAGTGAGGGTTTTAACAAAGATCTGCAT 31050 Score = 100 bits (110), Expect = 2e-16 Identities = 154/216 (71%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 ||||| | ||| ||||| ||||| || || ||||| || | ||| || | | | || Sbjct 35650 AACACAAGATGAAGAGTCGATTCTTTCTGAATATTGTAGTCAGCGAGAGTCCTTCCATCT 35591 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 ||||| || || || |||||||||| | ||||| ||| | || | || || ||||| Sbjct 35590 TCCAACTGCTTACCAGCAAAAATCAGTCTTTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 35531 Query 33658 GCAATTTTCTGTTTCAACATAGTCAC-GGTGTC---GCTTGATTCCACGTCAACCGTGAT 33713 ||| || ||||| | | |||| |||||| |||| ||||| |||| ||||| Sbjct 35530 TGAATCTTGGCTTTCA-CGTTGTCAATGGTGTCAGAGCTT---TCCACCTCAAGAGTGAT 35475 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| ||||| | ||||| |||||||||||||| Sbjct 35474 GGTTTTTCCTGTGAGGGTTTTCACAAAGATCTGCAT 35439 Score = 95.1 bits (104), Expect = 8e-15 Identities = 153/216 (71%), Gaps = 7/216 (3%) Strand=Plus/Minus Query 33538 AACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCG 33597 ||||| | ||| || || || || || || |||||||| | ||||| | | | || Sbjct 31799 AACACAAGATGAAGGGTCGATTCCTTCTGAATATTGTAATCAGCCAGTGTTCTTCCATCT 31740 Query 33598 TCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCG 33657 ||||| || || || ||||||||||| | ||||| ||| | || | |||||||||||| Sbjct 31739 TCCAACTGCTTACCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATACCTTCTTTGTCC 31680 Query 33658 GCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGA---TTCCACGTCAACCGTGAT 33713 ||| || | | ||||| ||| | ||||||| || |||||| |||| || || Sbjct 31679 TGAATCTT-GGCCTTAACATTGTCAATGGTGTCG--AGAACTTTCCACTTCAAGGGTAAT 31623 Query 33714 CGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || || || || || || |||||||| ||||| Sbjct 31622 AGTCTTGCCAGTCAAGGTCTTCACAAAGATTTGCAT 31587 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||||| || ||||| ||| || || ||||||||||| | Sbjct 31585 CCACCACGAAGACGAAGGACCAAGTGGAGAGTTGACTCCTTCTGGATGTTGTAATCTGCA 31526 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || |||| || | ||| ||||| |||||||||| | |||||| ||| | || Sbjct 31525 AGAGTACGGCCGTCTTCAAGTTGCTTTCCAGCAAAAATCAGCCTCTGCTGGTCTGGGGGA 31466 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| || || | || ||||| ||| | ||||||| |||||| Sbjct 31465 ATGCCTTCTTTGTCCTGGATCTT-GGCTTTAACATTGTCAATGGTGTCGGAGCTTTCCAC 31407 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTT 33734 |||| ||||| || || || || | ||||| Sbjct 31406 TTCAAGGGTGATGGTCTTTCCAGTGAGGGTTTT 31374 >seq23168 Length=55519 Score = 111 bits (122), Expect = 1e-19 Identities = 164/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | ||| | ||| ||||| ||| || || |||||||| |||| Sbjct 53715 CACCACCACGGAGACGGAGCACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGG 53774 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 || ||||| | || || | || |||||||| |||||||| |||||||| ||| | | Sbjct 53775 CAAGAGTGCGACCATCCTCAAGCTGCTTTCCGGCGAAAATCAATCGCTGCTGGTCTGGGG 53834 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| ||||| || || ||| | ||| ||| | |||||| || || Sbjct 53835 GAATCCCTTCCTTGTCTTGGATCTTGGCTTTGA-CATTGTCGATGGTGTCAGAAGACTCA 53893 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | |||||||| || || |||| ||||| || ||||||||||| Sbjct 53894 ACCTCTAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCAT 53943 >seq26813 Length=197329 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 ||||||| | | ||| | || | || || ||| ||| || || |||||||| || | Sbjct 149227 CACCACCACGGAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAG 149168 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 ||||| ||| | || || | || || || || |||||||| |||||||| ||| | | Sbjct 149167 CTAGTGTTCGTCCATCCTCAAGCTGCTTACCTGCGAAAATCAACCGCTGCTGGTCTGGTG 149108 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | ||||| ||||| ||| || || ||||| ||| | |||||| ||| || Sbjct 149107 GAATGCCTTCCTTGTCCTGAATCTTAGCCTT-AACATTGTCGATGGTGTCTGATGACTCT 149049 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | || || || ||||| || | || || |||||||||||||| Sbjct 149048 ACCTCCAAGGTAATAGTCTTACCCGTCAGGGTCTTCACAAAGATCTGCAT 148999 >seq12531 Length=12345 Score = 87.8 bits (96), Expect = 1e-12 Identities = 99/133 (74%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| || |||| ||| ||||| ||||| |||||| ||| || || ||||| || || | Sbjct 12143 ACCTCCCCTCAGACGCAACACTAAATGGAGAGTGGACTCCTTCTGGATGTTATAGTCTGC 12202 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||||| | | || || | |||||| || ||||| |||||||||||||| ||| | || Sbjct 12203 AAGTGTCCTGCCATCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGCTGGTCTGGGGG 12262 Query 33642 CACACCTTCTTTG 33654 | ||| || ||| Sbjct 12263 AATACCCTCCTTG 12275 >seq23505 Length=59109 Score = 82.4 bits (90), Expect = 5e-11 Identities = 157/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| | | ||| | ||||| || || || ||| || || ||||||||||| | Sbjct 2898 CCACCACGAAGACGAAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCAGCA 2957 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || || || || || || ||||| ||||| | |||||| || | || Sbjct 2958 AGGGTCCGGCCATCCTCAAACTGCTTACCAGCAAAGATCAACCTCTGCTGGTCCGGGGGA 3017 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||| || ||||| || || | | ||||| ||| | ||||||| |||||| Sbjct 3018 ATACCCTCCTTGTCCTGGATCTT-AGCCTTAACATTGTCAATGGTGTCGGAGCTTTCCAC 3076 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 |||| ||||| || || || || | || || || |||||||||||| Sbjct 3077 CTCAAGGGTGATGGTCTTGCCGGTGAGTGTCTTGACGAAGATCTGCATA 3125 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328568302052160