Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq28317 107 2e-18 seq12531 107 2e-18 seq18302 102 8e-17 >seq28317 Length=665 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || || |||||||| | ||| ||| ||| || ||||| ||||||| Sbjct 384 GACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGCCCATCCTCAAGCTGCTTACCGGCG 443 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | |||||||||||| || || ||||| ||||| |||||| ||||| Sbjct 444 AAGATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTATCTTGTATTTTTGCTTTCACA 503 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | |||||| | |||||| || | || | ||||| || |||||||| || Sbjct 504 TTGTCAATAGTATCTGAGCTCTCCACCTCCAATGTGATNGTTTTCCCGGTCAGAGTCTTC 563 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 564 ACGAAGATCTGCAT 577 >seq12531 Length=12345 Score = 107 bits (118), Expect = 2e-18 Identities = 140/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || || |||||||| | ||| ||| ||| || ||||| ||||||| Sbjct 11949 GACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGCCCATCCTCAAGCTGCTTACCGGCG 12008 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | |||||||||||| || || ||||| ||||| |||||| ||||| Sbjct 12009 AAGATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTATCTTGTATTTTTGCTTTCACA 12068 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | |||||| | |||||| || | || | ||||| || |||||||| || Sbjct 12069 TTGTCAATAGTATCTGAGCTCTCCACCTCCAATGTGATAGTTTTCCCGGTCAGAGTCTTC 12128 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 12129 ACGAAGATCTGCAT 12142 >seq18302 Length=24432 Score = 102 bits (112), Expect = 8e-17 Identities = 139/194 (72%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || || |||||||| | ||| ||| ||| || ||||| ||||||| Sbjct 6288 GACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGCCCATCCTCAAGCTGCTTACCGGCG 6347 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 | || || | |||||||||||| || || ||||| ||||| || ||| ||||| Sbjct 6348 AATATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTATCTTGTATCTTTGCTTTCACA 6407 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | |||||| | |||||| || | || | |||||| || |||||||| || Sbjct 6408 TTGTCAATAGTATCTGAGCTCTCCACCTCCAATGTGATCGTTTTCCCGGTCAGAGTCTTC 6467 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 6468 ACGAAGATCTGCAT 6481 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476409396860280