Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq22151 86.0 5e-12 seq24549 82.4 6e-11 >seq22151 Length=46047 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 ||||||||||| | || ||| || || || || |||| ||| || ||||| || ||| Sbjct 13859 GACAAAGAAGGGATACCTCCTGACCAGCAGAGACTAATTTTTGCTGGAAAACAGTTGGAA 13918 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| | |||| ||| ||||||||||| || |||||||| ||||| || | || ||| Sbjct 13919 GATGGTCGAACTCTGGCTGATTACAACATCCAGAAAGAATCAACACTTCACCTGGTTTTG 13978 Query 106473 AGGTTACGAGGAGGA 106487 ||| | | |||||| Sbjct 13979 AGGCTGAGGGGAGGA 13993 >seq24549 Length=72154 Score = 82.4 bits (90), Expect = 6e-11 Identities = 155/227 (68%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 106236 TTTGTCATTTATAAGAGTTTAAAAATGCAAATTTTTGTTAAAACATTGACTGGCAAGACC 106295 |||||| ||| || | || | | |||||||| |||||||| || | || ||||||||| Sbjct 57573 TTTGTCGTTTTTATCAATT-ATAGATGCAAATCTTTGTTAAGACCCTCACCGGCAAGACC 57631 Query 106296 ATTACCGTGGAAACAGAACCCGGCGATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGAC 106355 || || | || || | ||| | ||| | | || || ||| ||| ||| Sbjct 57632 ATCACTCTCGAGGTTGAGAGCTCCGACACAATTGACAATGTCAAGGCAAAGATTCAAGAC 57691 Query 106356 AAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAAGAT 106415 || ||||| | ||| |||||| |||||| | || | ||| || || |||||||| ||| Sbjct 57692 AAGGAAGGAATTCCCCCTGATCAGCAAAGGTTGATCTTTGCTGGAAAGCAATTAGAGGAT 57751 Query 106416 TCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACA 106462 || |||| | | || || ||||| ||||| || || || || || Sbjct 57752 GGTAGAACTCTTGCAGACTATAACATCCAAAAGGAGTCCACCCTCCA 57798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402163507402784