Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq24612 120 4e-21 >seq24612 Length=73035 Score = 120 bits (132), Expect = 4e-21 Identities = 345/524 (66%), Gaps = 14/524 (3%) Strand=Plus/Minus Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812 ||||||| || | |||| | || ||||||||||| ||| || || ||| || || Sbjct 59980 TGTTCCCAATTCAGTACCCACAAATTTGGGAAATGTA-CAAGAAAGCTATGGCATCTTTC 59922 Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGAC 1455872 ||||| || || || ||||| || ||||| || || |||| || | | Sbjct 59921 TGGACGGCAGAAGAAGTCGATCTATCTGCCGATACTCGTCATTGGGAAAACCTAACATCC 59862 Query 1455873 GACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGT 1455932 | || | |||||||||| || || || || |||||| || ||| || |||||||| Sbjct 59861 GGTGAAAGGCATTTCATCACTCATGTGCTTGCGTTTTTT-GCTGCCTCAGACGGCATCGT 59803 Query 1455933 GGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTT 1455992 |||||||| || || | || |||||||| |||||| | | ||||| ||| || Sbjct 59802 TTTAGAGAACCTCGCTGGAAGGTTCATGAAAGATGTCCAAGTTGCTGAGGCGCGTGCTTT 59743 Query 1455993 TTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGA 1456052 || || ||||| |||||||| || || ||||| || || | ||| | ||| | || Sbjct 59742 CTATGGATTCCAAATCGCCATTGAGAATATCCATTCCGAGATGTACAGTTTGCTGTTGGA 59683 Query 1456053 CACCTACGTCAAGGACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCC 1456112 | ||| |||||||| | | ||| ||| | || || || ||||| || | || Sbjct 59682 GTCGTACATCAAGGACTCTGACGAAAAGAGTAGGTTGTTCCGGGCAATCGAGACTATCCC 59623 Query 1456113 GTCGGTGAGGAAA--AAGGCCGACTGGGCGATGAAGTGGATCAACAAGGAGGGC-CTCGA 1456169 | ||| |||| ||||| | ||||| | |||||| || ||| || | Sbjct 59622 TT--GTGTTGAAAAGAAGGCGAAGTGGGCCCTTCGTTGGATC------GATGGCTCTGAA 59571 Query 1456170 CACTTTGCCGAGCGGCTCGTCGGCTTTGC-CGCGTCGAGGGCATCTTTTTCTCGGGCAGT 1456228 ||| || ||||| | || | ||||| | || || || || || || || || ||| Sbjct 59570 ACCTTCGCAGAGCGTTTGGTGGCTTTTGCTTGTGTAGAAGGGATTTTCTTTTCCGGAAGT 59511 Query 1456229 TTCTGCGCCATCTTTTGGCTCAAGAAGCGCGGCCTCATGCCCGG 1456272 ||||| | || |||||| | || ||||| || | |||||||| Sbjct 59510 TTCTGTTCAATATTTTGGTTGAAAAAGCGGGGGTTAATGCCCGG 59467 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7174544086891426