Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq24612 163 2e-35 >seq24612 Length=73035 Score = 163 bits (180), Expect = 2e-35 Identities = 385/579 (66%), Gaps = 2/579 (0%) Strand=Plus/Minus Query 43707 TGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTT 43766 |||| |||||||| || | | || ||| |||||||||| ||||| ||| || || | Sbjct 59980 TGTTCCCAATTCAGTACCCACAAATTTGGGAAATGTACAAGAAAGCTATGGCATCTTTCT 59921 Query 43767 GGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCAC 43826 |||| ||||||||||| ||| | || || |||||| ||| | | Sbjct 59920 GGACGGCAGAAGAAGTCGATCTATCTGCCGATACTCGTCATTGGGAAAACCTAACATCCG 59861 Query 43827 AAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCA 43886 |||| ||||| || || || | |||||||||||||| ||||| || || Sbjct 59860 GTGAAAGGCATTTCATCACTCATGTGCTTGCGTTTTTTGCTGCCTCAGACGGCATCGTTT 59801 Query 43887 ATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTT 43946 || || | | | | |||| | |||| || ||| | | || || || ||| | Sbjct 59800 TAGAGAACCTCGCTGGAAGGTTCATGAAAGATGTCCAAGTTGCTGAGGCGCGTGCTTTCT 59741 Query 43947 ATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCTGATAGATA 44006 |||| || ||||| ||||| || ||||| ||||| || ||||||||| | ||| | || Sbjct 59740 ATGGATTCCAAATCGCCATTGAGAATATCCATTCCGAGATGTACAGTTTGCTGTTGGAGT 59681 Query 44007 CGTACATCAAAGATGGGCACGAGAAGCATCGATTGTTTAATGCGATAGAAACAGTACCTG 44066 |||||||||| || |||| ||| | | ||||| || || || || | ||| Sbjct 59680 CGTACATCAAGGACTCTGACGAAAAGAGTAGGTTGTTCCGGGCAATCGAGACTATCCCTT 59621 Query 44067 CGATTAAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTCTTTTGGAG 44126 || || | || || | ||||||||| ||||| || ||| | || | || Sbjct 59620 GTGTTGAAAAGAAGGCGAAGTGGGCCCTTCGTTGGATCGATGGCTCTGAAACCTTCGCAG 59561 Query 44127 AACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCA 44186 | || | || || ||||| ||| ||||| ||||||||||| ||| |||| | || Sbjct 59560 AGCGTTTGGTGGCTTTTGCTTGTGTAGAAGGGATTTTCTTTTCCGGAA-GTTTCTGTTCA 59502 Query 44187 -TATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATA 44245 |||||||||| || || || || || ||||| || || || || || |||||||| || Sbjct 59501 ATATTTTGGTTGAAAAAGCGGGGGTTAATGCCCGGATTAACTTTCTCGAATGAGTTGATT 59442 Query 44246 AGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTG 44284 | || ||||| || || || |||||||| |||||| Sbjct 59441 TCAAGAGACGAAGGTTTGCACTGTGATTTTGCGTGCTTG 59403 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397291919357365