Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq26577 111 2e-19 seq24630 98.7 1e-15 seq24551 96.9 4e-15 seq24612 89.7 6e-13 >seq26577 Length=143161 Score = 111 bits (122), Expect = 2e-19 Identities = 281/420 (67%), Gaps = 8/420 (2%) Strand=Plus/Plus Query 11483 TCAAGGATATCCACGCGATTAGTGGCCGCAATAACCACAATGCCAGTCTCATTGTCAAAG 11542 ||||| ||||| | ||||| || ||||||| ||| | || ||||| | || || Sbjct 122698 TCAAGAATATCTGCACGATTGGTTGCCGCAACAACTATTATACCAGTATTTCCTTCGAAA 122757 Query 11543 CCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGCATA 11602 |||||||| || || | || ||| || | || ||||| || ||||||||| || | | Sbjct 122758 CCATCCATTTCAGTCAATAGTTGGTTCAGCGTCTGTTCCCTTTCATCATTTCCT--CCTC 122815 Query 11603 CCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATACATG 11660 | | |||| | | ||| || || |||||||| ||||||| || ||||| || | Sbjct 122816 CAATTCCAGTCCCTCTTTGGCGCCCAACAGCATCAATTTCATCAACAAATACAATGCAAG 122875 Query 11661 GTTGATTTTCGCGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAA 11720 | |||||| ||| | | || ||||| || || | ||| || |||||||||| Sbjct 122876 GAGCATTTTCCTTGGCCTTCTTGAAAAGATCACGGACTCGAGAGGCTCCTACACCAACAA 122935 Query 11721 ACATCTCCACAAAGTTTGCGGCAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCG 11779 ||||||| || || | || | || | || || ||||| ||| | |||||| || Sbjct 122936 ACATCTCAACGAATTCTGAACCTGA-AATTGAGAAAAATGGAACACCCGCTTCACCAGCA 122994 Query 11780 ATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGG 11839 || || || || ||||| || || ||||| || ||| | ||||| | ||| Sbjct 122995 ATTGCCTTTGCTAGCAGGGTTTTCCCAGTACCAGGAGGACCAACAAGAAGAACACCTTTT 123054 Query 11840 GGGAT-CTTGGCACCACTTCCAAAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTC 11898 || || | | | |||| | || | ||||||| |||| ||| | ||| ||||| | ||| Sbjct 123055 GGAATACGAGCCCCCAC-TGCAGTAAATCTCTCAGGTTTCTTCAAAAATTCCACGACCTC 123113 >seq24630 Length=73539 Score = 98.7 bits (108), Expect = 1e-15 Identities = 156/224 (70%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 111941 TGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCTTGG 112000 || |||||||| || |||||||| || || ||||| | ||| ||| ||||| | ||| Sbjct 27530 TGAGGTCTTGGAGTGCCAGCATTAAACAGCGTTGGAGATGCATGAGTGAACCAGCGTTGA 27471 Query 112001 GACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATTGCG 112060 |||||| | ||||||| | | |||| ||||| || ||| |||||| || | | Sbjct 27470 GACATCAAATGATATGTCTTGATGGCAGATTCAATATCCTCCTTGTGGATTCCAACAGAT 27411 Query 112061 ACCCGCATGAACATGTACTGTGGGGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAG 112120 || | ||| | ||||| ||||| |||| | | | || | | | | ||| || Sbjct 27410 ACTCTCATCAGCATGTGTTGTGGCCTTTCTACAATTTTTCCCTGAATCTTTAAAAGGTAA 27351 Query 112121 CTCTTCTCAAGGGTTTTGAGACCAAAGTAACCAAAATCATAGTC 112164 | ||||||||||||||| |||||||||| || | ||| |||| Sbjct 27350 GACCTCTCAAGGGTTTTGAAACCAAAGTAATCATAGTCAAAGTC 27307 >seq24551 Length=72183 Score = 96.9 bits (106), Expect = 4e-15 Identities = 191/279 (68%), Gaps = 8/279 (3%) Strand=Plus/Plus Query 11540 AAGCCATCCATCTCGGTGAGTAATTGATTAATTGTTTGTTCTCTCTCATCATTTGCTGGC 11599 || |||||||| || || | | ||||| || || || || |||||||||||| | | Sbjct 56434 AACCCATCCATTTCAGTCAAGAGCTGATTGATAGTCTGCTCCCTCTCATCATTTCCA--C 56491 Query 11600 ATACCA--CCAGCACTGCGTTGCTTGCCCACCGCATCAATCTCATCAATGAAGACAATAC 11657 | | | || |||| | ||| | ||||| ||||||||||||||||| || ||||| | Sbjct 56492 CTCCAAGTCCTGCACCTCTCTGCCTTCCCACAGCATCAATCTCATCAATAAACACAATGC 56551 Query 11658 ATGGTTGATTTTCG--CGGGCGATTTCAAAGAGATCGCGAACCCTTTTGGCACCCACACC 11715 | ||| ||||| || | ||||| | ||| | ||| || || |||||||| Sbjct 56552 AAGGT--GCTTTCGATTTCGCCTTCTCAAACAAATCCCTAACTCTAGAAGCTCCCACACC 56609 Query 11716 AACAAACATCTCCACAAAGTTTGCGGCAGAGCACTGGATGAATGGGACATTTGATTCACC 11775 ||||||| ||| ||||| | || || | || || || || ||| | |||||| Sbjct 56610 CACAAACAACTCAACAAACTCTGATGCTGCACAAGAGAAAAACGGTACACCAGCTTCACC 56669 Query 11776 CGCGATGGCTCGGGCGAGGAGGGTCTTTCCCGTACCTGG 11814 || | |||| || | |||||||| || |||||||| Sbjct 56670 AGCTACTGCTCTAGCTAAAAGGGTCTTCCCAGTACCTGG 56708 >seq24612 Length=73035 Score = 89.7 bits (98), Expect = 6e-13 Identities = 160/233 (69%), Gaps = 3/233 (1%) Strand=Plus/Plus Query 122659 GCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCT 122718 ||||| || ||| | ||| || |||| ||||| | ||||| ||||| || || Sbjct 59410 GCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATCAACTCATTCGAGAAAGTTAATCCG 59469 Query 122719 GGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATA 122778 ||||| | |||||||| ||||||||| | || | ||||| ||||| ||||| || Sbjct 59470 GGCATTAACCCCCGCTTTTTCAACCAAAATATTGAACAGAAACTTCCGGAAAAGAAAATC 59529 Query 122779 CCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAGACTTTGCATCAAAC 122838 || || ||||| ||||| || | | || || ||||||| ||| |||| | | Sbjct 59530 CCTTCTACACAAGCAAAAGCCACCAAACGCTCTGCGAAGGTTTCAGAGC---CATCGATC 59586 Query 122839 CATTTCATTGCCCATTTCGCCTTCTTCTCAATACATGGTACAGTTTGGATGGC 122891 || | ||||| ||||||||||| |||| ||| || | ||| | ||| || Sbjct 59587 CAACGAAGGGCCCACTTCGCCTTCTTTTCAACACAAGGGATAGTCTCGATTGC 59639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627766083400800