Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq21361 100 4e-16 seq24551 89.7 6e-13 >seq21361 Length=40015 Score = 100 bits (110), Expect = 4e-16 Identities = 186/271 (69%), Gaps = 14/271 (5%) Strand=Plus/Plus Query 11924 GAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTCAACCACGAGTC 11983 ||||||||| ||||||||||| | || |||||| || ||||| |||||||||||||| Sbjct 24424 GAATTACCGCGAATCCTATGGGATATTCGCGTGCAACGGGATTCTGTTCAACCACGAGTC 24483 Query 11984 ACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCA------CCGATGGTATCAAACA 12037 || ||||| || | |||||||||||| |||||| | ||| || | | | | Sbjct 24484 TCCTCGTCGGGGTGAGAATTTCGTGACAAGGAAGATAACCCGGGCCGTAGGGAGGATAAA 24543 Query 12038 AATCGTGGCGGGT-GAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACT 12096 ||||| | | |||| || | || |||||||| || | || ||| |||| Sbjct 24544 AATCG----GATTACAGAGCAAGGTGTTT---TTGGGGAATCTACAGGCGTCGAGAGACT 24596 Query 12097 GGGGACATGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGG 12156 |||| ||| ||||| || ||||| |||||| | | || || ||||| | | | Sbjct 24597 GGGGCTTTGCTGGAGACTACGTAGAAGCAATGTGGATGATGCTACAGCAAGAGAAACCAG 24656 Query 12157 ACGAATATGTCGTCGCGACGGGGGAGACACA 12187 |||| || || || || |||| ||| |||| Sbjct 24657 ACGACTACGTTGTTGCAACGGAGGATTCACA 24687 >seq24551 Length=72183 Score = 89.7 bits (98), Expect = 6e-13 Identities = 190/279 (68%), Gaps = 6/279 (2%) Strand=Plus/Plus Query 14153 AAGCCATCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCGCGTTCATCATTCGCAGGC 14212 || |||||||| ||||||||||| |||||||| || || || | |||||||| || | Sbjct 56434 AACCCATCCATTTCAGTCAAGAGCTGATTGATAGTCTGCTCCCTCTCATCATTTCCA--C 56491 Query 14213 ATACCA--CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCATCGATGAAAACGATAC 14270 | | | || |||| | ||| | || || || ||||| ||||| || || || || | Sbjct 56492 CTCCAAGTCCTGCACCTCTCTGCCTTCCCACAGCATCAATCTCATCAATAAACACAATGC 56551 Query 14271 ATGGTTGATTTTCA-CGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCC 14329 | || || ||| | || ||||| | ||| | ||||| || || |||||| Sbjct 56552 AAGG-TGCTTTCGATTTCGCCTTCTCAAACAAATCCCTAACTCTAGAAGCTCCCACACCC 56610 Query 14330 ACAAACATCTCCACAAAATTGGCGGCGGAACATTGGATGAAGGGGACGTTAGATTCACCC 14389 ||||||| ||| ||||| | | || | ||| || || || || || |||||| Sbjct 56611 ACAAACAACTCAACAAACTCTGATGCTGCACAAGAGAAAAACGGTACACCAGCTTCACCA 56670 Query 14390 GCGATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGT 14428 || | |||| || | ||||||||||| || |||||| Sbjct 56671 GCTACTGCTCTAGCTAAAAGGGTCTTCCCAGTACCTGGT 56709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618173346805880