Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq26577 132 6e-26 seq24551 116 4e-21 >seq26577 Length=143161 Score = 132 bits (146), Expect = 6e-26 Identities = 288/419 (69%), Gaps = 18/419 (4%) Strand=Plus/Plus Query 9557 TCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACAATACCTGT--TTCATTATCAA 9614 ||||| ||||| | ||||| || || || | || | ||||| || ||| || | | Sbjct 122698 TCAAGAATATCTGCACGATTGGTTGCCGCAACAACTATTATACCAGTATTTCCTT--CGA 122755 Query 9615 AACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGCA 9674 |||||||||| || ||||| |||||||| | || ||||||| ||||||||| || | Sbjct 122756 AACCATCCATTTCAGTCAATAGTTGGTTCAGCGTCTGTTCCCTTTCATCATTTCCT--CC 122813 Query 9675 TACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCA 9732 | | | |||| | | ||| || || |||||||| ||||||| || || ||||| Sbjct 122814 TCCAATTCCAGTCCCTCTTTGGCGCCCAACAGCATCAATTTCATCAACAAATACAATGCA 122873 Query 9733 TGGTTGATTTT-CGCGAGCGACTTCAAAGAGATCCCGTACACGCTTGGCGCCCACACCAA 9791 || ||||| | | | ||| ||| ||||| || || || ||| || ||||||| Sbjct 122874 AGGAGCATTTTCCTTGGCCTTCTTGAAA-AGATCACGGACTCGAGAGGCTCCTACACCAA 122932 Query 9792 CAAACATCTCCACAAAGTTTGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCC 9850 |||||||||| || || | || | ||| |||| || || || ||| | |||||| Sbjct 122933 CAAACATCTCAACGAATTCTGAACCTGAA-ATTGAGAAAAATGGAACACCCGCTTCACCA 122991 Query 9851 GCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCT 9910 ||||| || || || || || || || ||||| || ||| | || || ||||| Sbjct 122992 GCAATTGCCTTTGCTAGCAGGGTTTTCCCAGTACCAGGAGGACCAACAAGAAGAACACCT 123051 Query 9911 CGTGGAAT-CTTGGCGCCACTTCCAAAGT--ATCTCTCAGGTTGCTTAAGAAAATCCAC 9966 |||||| | | | ||||| | ||| |||||||||||| ||| | ||| ||||| Sbjct 123052 TTTGGAATACGAGCCCCCACTGC---AGTAAATCTCTCAGGTTTCTTCAAAAATTCCAC 123107 >seq24551 Length=72183 Score = 116 bits (128), Expect = 4e-21 Identities = 199/281 (71%), Gaps = 12/281 (4%) Strand=Plus/Plus Query 9614 AAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 9673 || |||||||| || ||||| || || || ||||| || |||| |||||||| | | Sbjct 56434 AACCCATCCATTTCAGTCAAGAGCTGATTGATAGTCTGCTCCCTCTCATCATTTCCA--C 56491 Query 9674 ATACCA--CCAGCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGC 9731 | | | || |||| | ||| ||||||| ||||||||||||||||| || || |||| Sbjct 56492 CTCCAAGTCCTGCACCTCTCTGCCTTCCCACAGCATCAATCTCATCAATAAACACAATGC 56551 Query 9732 ATGGTTGATTTTCGCGAGCGACT--TCAAAGAGATCCCGTACACGCTTG--GCGCCCACA 9787 | ||| ||||| || || ||||| | ||||| || || || | || |||||| Sbjct 56552 AAGGT--GCTTTCGATTTCGCCTTCTCAAACAAATCCC-TA-ACTCTAGAAGCTCCCACA 56607 Query 9788 CCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTAGATTCA 9847 || ||||||| ||| ||||| | || || | ||| || || || ||| || |||| Sbjct 56608 CCCACAAACAACTCAACAAACTCTGATGCTGCACAAGAGAAAAACGGTACACCAGCTTCA 56667 Query 9848 CCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 9888 || || | |||| || | ||| ||||| || |||||||| Sbjct 56668 CCAGCTACTGCTCTAGCTAAAAGGGTCTTCCCAGTACCTGG 56708 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583013840086520