Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq24612 105 7e-18 seq19288 84.2 2e-11 seq25416 82.4 8e-11 >seq24612 Length=73035 Score = 105 bits (116), Expect = 7e-18 Identities = 306/464 (66%), Gaps = 8/464 (2%) Strand=Plus/Plus Query 74763 TGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCA 74822 ||| | ||||| ||||| ||||| |||||||| || | | || ||||| | || Sbjct 59422 TGCAAACCTTCGTCTCTTGAAATCAACTCATTCGAGAAAGTTAATCCGGGCATTAACCCC 59481 Query 74823 CGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACAC 74882 ||||| ||||||||||| || | |||||| || ||||| || ||||| ||||| Sbjct 59482 CGCTTTTTCAACCAAAATATTGAACAGAAACTTCCGGAAAAGAAAATCCCTTCTACACAA 59541 Query 74883 GCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTCATCCAAGTCTGAGCCCAT 74942 ||||| || || | || | ||||| | | || | | |||||| | ||||| Sbjct 59542 GCAAAAGCCACCAAACGCTCTGCGAAGGTTTCAGAGCCATCGATCCAACGAAGGGCCCAC 59601 Query 74943 TCAGCTTTTCGTTTGACCGC-AGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTC 75001 | || ||| ||| | | | ||||| ||| ||||| || |||| | || ||| || Sbjct 59602 TTCGC-CTTCTTTTCAACACAAGGGATAGTCTCGATTGCCCGGAACAACCTACTCTTTTC 59660 Query 75002 TTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTC 75061 || | ||||||| | | || | || | |||| |||| ||||| || ||| Sbjct 59661 GTCAGAGTCCTTGATGTACGACTCCAACAGCAAACTGTACATCTCGGAATGGATATTCTC 59720 Query 75062 GTTGAACGA-CTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTT--TGA 75118 || ||| ||| | | ||||||| |||||||| |||| || ||||| || ||| Sbjct 59721 AATG-GCGATTTGGAATCCATAGAAAGCACGCGCCTCAGCAACTTGGACATCTTTCATGA 59779 Query 75119 AAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTAC 75178 | | || ||| ||||| | ||||||||||| ||||| || ||||| || || || Sbjct 59780 ACCTTCCA--GCGAGGTTCTCTAAAACGATGCCGTCTGAGGCAGCAAAAAACGCAAGCAC 59837 Query 75179 CATTTTGATAAAGTGGCGCTCATCGTCAGTGAGTTTGTCCCAAT 75222 |||| || || | ||| || || || || ||||||| Sbjct 59838 ATGAGTGATGAAATGCCTTTCACCGGATGTTAGGTTTTCCCAAT 59881 >seq19288 Length=28100 Score = 84.2 bits (92), Expect = 2e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 79625 TGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAAT 79683 ||||||| |||| | || |||| ||||||||||||||||||||||||||| ||||| Sbjct 4920 TGCTTTCATTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAAC 4979 Query 79684 TGAGCTACGAAAGCAA 79699 ||||||| |||||||| Sbjct 4980 TGAGCTATGAAAGCAA 4995 >seq25416 Length=88659 Score = 82.4 bits (90), Expect = 8e-11 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 79624 CTGCTTTCGATGAGCTTTGATCTCATTACCTCCCGCTTACTAAACGGGTGCTCT-ACCAA 79682 ||||| ||| |||| | || |||| ||||||||||||||||||||||||||| ||||| Sbjct 41237 CTGCTCTCGTTGAGAGTCGAACTCAAGACCTCCCGCTTACTAAACGGGTGCTCTAACCAA 41178 Query 79683 TTGAGCTACGAAAGC 79697 |||||||||| ||| Sbjct 41177 CTGAGCTACGAGAGC 41163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546984301905400