Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq26075 84.2 2e-11 >seq26075 Length=110386 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 34610 TTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGG 34669 || || || || ||||||||||| ||||| ||| | ||||| ||||| | || ||||| Sbjct 15909 TTTTATGTAGCCAATGGGGAGCTATCCTGTCAGATGTATCAGCGATCTGCGGATATGGGT 15968 Query 34670 TTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGT 34728 || || || || || |||||||| ||| || |||| || | |||||| |||||||| Sbjct 15969 TTGGGAGTACCATTTAACATTGCATCTTATGCATTGCTGACATGCATGATAGCTCATGT 16027 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 6617 ACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAAC 6676 |||||||| |||||| | || |||| || ||| |||||||| || || || || || Sbjct 16027 ACATGAGCTATCATGCATGTCAGCAATGCATAAGATGCAATGTTAAATGGTACTCCCAAA 15968 Query 6677 CCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 ||||| || | ||||| ||||| | ||| ||||| ||||||||||| || || || || Sbjct 15967 CCCATATCCGCAGATCGCTGATACATCTGACAGGATAGCTCCCCATTGGCTACATAAAA 15909 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448072600096560