Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq24549 122 6e-23 seq24416 111 1e-19 seq10662 104 2e-17 seq23505 93.3 3e-14 seq18302 91.5 1e-13 seq28317 87.8 1e-12 seq22151 86.0 4e-12 seq12531 86.0 4e-12 seq18952 82.4 5e-11 >seq24549 Length=72154 Score = 122 bits (134), Expect = 6e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || ||||| || || || ||||| || ||||| || || || || | Sbjct 58280 ATGCAGATCTTTGTTAAGACACTGACTGGAAAGACTATCACCCTGGAGGTAGAAAGTTCA 58339 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | ||| |||| | | ||||||||||| | || ||||| || Sbjct 58340 GACACCATTGATAATGTGAAAGCAAAGA-TCCAAGACAAAGAAGGGATTCCACCAGACCA 58398 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||||||||||| ||||| ||||| || || || || | | ||| | | |||||||| Sbjct 58399 GCAGCGTTTAATTTTTGCTGGCAAGCAGCTTGAGGATGGGAGGACTCTTGCTGATTACAA 58458 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 ||| || |||||||||||| | ||||| || | | || |||||||| Sbjct 58459 CATCCAGAAAGAGTCCACACTCCATTTGGTGCTCCGACTGAGAGGAGGA 58507 Score = 93.3 bits (102), Expect = 3e-14 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 ||||| || || ||||| |||||||| || || || ||||||||||| ||||| | | Sbjct 57596 ATGCAAATCTTTGTTAAGACCCTCACCGGCAAGACCATCACTCTCGAGGTTGAGAGCTCC 57655 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| | || | ||| ||| ||||| ||||| | || || ||||| Sbjct 57656 GACACAATTGACAATGTCAAGGC-AAAGATTCAAGACAAGGAAGGAATTCCCCCTGATCA 57714 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | || || ||||| || || ||| | || || | | ||| | | || || || Sbjct 57715 GCAAAGGTTGATCTTTGCTGGAAAGCAATTAGAGGATGGTAGAACTCTTGCAGACTATAA 57774 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| ||||| |||||||| Sbjct 57775 CATCCAAAAGGAGTCCAC 57792 >seq24416 Length=70076 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || |||||||||||||| ||||| || ||||| || || || || | | Sbjct 31050 ATGCAGATCTTTGTTAAAACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGCTCC 31109 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| |||| ||| ||||| | || || ||||| ||||| | || ||||| || Sbjct 31110 GACACCATTGACAATGTTAAAGC-CAAGATCCAGGACAAGGAAGGCATTCCCCCAGACCA 31168 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 ||| | | || ||||| || || ||||| ||||||| || ||| | | |||||||| Sbjct 31169 GCAGAGGCTGATTTTTGCTGGAAAGCAACTTGAAGACGGCCGTACTCTTGCAGATTACAA 31228 Query 23790 CATACAAAAAGAGTCCAC 23807 ||| || || ||||| || Sbjct 31229 CATCCAGAAGGAGTCAAC 31246 Score = 104 bits (114), Expect = 2e-17 Identities = 135/184 (73%), Gaps = 2/184 (1%) Strand=Plus/Plus Query 23625 TAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AA 23683 |||||||||||| ||||| || ||||| || ||||| || | | ||||| |||| || Sbjct 31373 TAAAACCCTCACTGGAAAGACCATCACCCTTGAAGTGGAAAGCTCCGACACCATTGACAA 31432 Query 23684 TATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATAT 23743 | ||||| | || || ||||||||||| | || ||||| || ||| | | || | Sbjct 31433 TGTTAAAGC-CAAGATCCAGGACAAAGAAGGCATTCCCCCAGACCAGCAGAGGCTGATTT 31491 Query 23744 TTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGT 23803 |||| || || ||||| ||||||| || ||| | | ||||||||||| || || |||| Sbjct 31492 TTGCTGGAAAGCAACTTGAAGACGGCCGTACTCTTGCAGATTACAACATCCAGAAGGAGT 31551 Query 23804 CCAC 23807 | || Sbjct 31552 CAAC 31555 Score = 100 bits (110), Expect = 2e-16 Identities = 148/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||||||||| ||||| || ||||| || || || || | Sbjct 35211 ATGCAGATATTCGTGAAAACCCTCACTGGAAAGACCATCACCCTTGAGGTGGAAAGTTCT 35270 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | |||| || || || || ||||| | || ||||| || Sbjct 35271 GACACCATTGATAACGTAAAGGCCAAGATCCAGGATAAGGAAGGCATTCCTCCAGACCAG 35330 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | || || ||||||||||| || || ||||||| || ||| | | ||||||||| Sbjct 35331 CAAAGGTTGATCTTTGCCGGCAAGCAGCTTGAAGACGGTCGTACTCTGGCTGATTACAAC 35390 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTT 23820 || || || || ||||| | || || ||| Sbjct 35391 ATTCAGAAGGAATCCACTCTTCACTTGGTT 35420 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||||||||| ||||||||||| ||||| || ||||| ||||| || || | | Sbjct 34983 ATGCAGATTTTCGTGAAAACCCTCACCGGAAAGACCATCACCCTCGAGGTGGAAAGCTCT 35042 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | || || || ||||| || || | || ||||| || Sbjct 35043 GACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCAG 35102 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||| | | || ||||| || || || || ||||| | || || | | ||||||||| Sbjct 35103 CAGAGGCTGATCTTTGCTGGGAAGCAGCTCGAAGATGGTCGGACCCTTGCTGATTACAAC 35162 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 35163 ATCCAGAAGGAGTCTAC 35179 Score = 89.7 bits (98), Expect = 3e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| || || ||||||||||| |||||||| |||||||| || || || | | Sbjct 35439 ATGCAGATCTTTGTGAAAACCCTCACAGGAAAAACCATCACTCTTGAGGTGGAAAGCTCT 35498 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| |||| | | ||| || ||| ||||| || || | || ||||| || Sbjct 35499 GACACCATTGACAACGTGAAAGCCAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCAG 35558 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 || | | || ||||| || || || ||||||| | | | ||| | | || ||||| Sbjct 35559 CAAAGACTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGGACTCTCGCTGACTACAAT 35618 Query 23791 ATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837 || || ||||| || || | ||| | || || ||| | | ||||| Sbjct 35619 ATTCAGAAAGAATCGACTCTTCATCTTGTGTTGAGGCTCAGGGGAGG 35665 >seq10662 Length=13073 Score = 104 bits (114), Expect = 2e-17 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 23603 TACTTAAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTG 23662 || || | |||||||| || ||||| || ||||| ||||| || ||||||||||| || | Sbjct 2036 TATTTCAGATGCAGATCTTTGTTAAGACGCTCACTGGAAAGACCATCACTCTCGAGGTCG 1977 Query 23663 ACTCCACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCG 23721 | | ||||| | || ||| ||||| | || ||| ||||| ||||| | || Sbjct 1976 AGAGTTCTGACACCATCGATAATGTTAAAGC-TAAGATTCAAGACAAGGAAGGCATCCCC 1918 Query 23722 CCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGC 23781 || || || ||| | | || |||||||| ||||| || ||||| | || || | | Sbjct 1917 CCTGACCAGCAGAGGCTGATCTTTGCCGGAAAACAGCTAGAAGATGGCCGAACACTTGCT 1858 Query 23782 GATTACAACATACAAAAAGAGTCCAC 23807 || |||||||| ||||| |||||||| Sbjct 1857 GACTACAACATCCAAAAGGAGTCCAC 1832 >seq23505 Length=59109 Score = 93.3 bits (102), Expect = 3e-14 Identities = 160/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 23610 AATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCAC 23669 |||||||||||| || || |||||||| || || || ||||| | || ||||| | | Sbjct 2669 AATGCAGATTTTTGTCAAGACCCTCACCGGGAAGACCATCACCTTGGAGGTTGAGAGCTC 2610 Query 23670 GGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATC 23728 ||||| | || ||| | || | || | | ||||| || || | |||||||| | Sbjct 2609 CGACACCATCGACAATGTCAAGGCCAAGA-TCCAGGACAAGGAGGGAATCCCGCCAGACC 2551 Query 23729 AACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACA 23788 | ||| | || || ||||| || || || || || || | ||||| | | ||||||| Sbjct 2550 AGCAGAGGTTGATCTTTGCTGGTAAGCAGCTTGAGGATGGCCGCACCCTGGCGGATTACA 2491 Query 23789 ACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 |||| ||||| ||||| || | || || || | ||| || | |||||| Sbjct 2490 ACATCCAAAAGGAGTCGACCCTTCACTTGGTGCTGAGGCTGAGGGGAGGA 2441 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| ||||| ||||| ||||| || ||||| || || || || | | Sbjct 3352 ATGCAGATCTTCGTAAAAACACTCACCGGAAAGACCATCACCCTAGAGGTGGAGAGCTCC 3293 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || || |||| || |||| | || | | || || ||||| | || || ||||| Sbjct 3292 GATACAATTGACAACGTTAAGGCTAAGA-TCCAGGATAAGGAAGGGATTCCCCCGGATCA 3234 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 || | | || || ||||| || || || || |||| ||| ||| ||| |||||||| Sbjct 3233 GCAAAGGCTTATTTTCGCCGGAAAGCAGCTTGAGGACGGACGTACTCTAGCTGATTACAA 3174 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGT 23819 ||| || || ||||| || | ||||| || Sbjct 3173 CATCCAGAAGGAGTCTACCCTCCATTTGGT 3144 >seq18302 Length=24432 Score = 91.5 bits (100), Expect = 1e-13 Identities = 159/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || || || ||||||||||| | || || || | | Sbjct 6481 ATGCAGATCTTCGTGAAGACTCTGACCGGGAAAACGATCACATTGGAGGTGGAGAGCTCA 6422 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | ||| |||| | | || || ||||| | || |||||||| Sbjct 6421 GATACTATTGACAATGTGAAAGCAAAGA-TACAAGATAAGGAAGGGATTCCACCAGATCA 6363 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | ||||| ||||| || || || || || | ||||| | | || ||||| Sbjct 6362 ACAGAGGCTCATATTCGCCGGTAAGCAGCTTGAGGATGGGCGCACCCTTGCAGACTACAA 6303 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || |||||||| || | ||| | || | ||| | || || ||| Sbjct 6302 TATCCAGAAAGAGTCTACTCTTCATCTTGTCCTCAGGCTCCGTGGTGGA 6254 >seq28317 Length=665 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || || || ||||| ||||| | || || || | | Sbjct 577 ATGCAGATCTTCGTGAAGACTCTGACCGGGAAAACNATCACATTGGAGGTGGAGAGCTCA 518 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | ||| |||||| | || || ||||| | || |||||||| Sbjct 517 GATACTATTGACAATGTGAAAGCAAAAA-TACAAGATAAGGAAGGGATTCCACCAGATCA 459 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || || ||||| || || || || || | ||||| | | || ||||| Sbjct 458 ACAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAGGATGGGCGCACCCTTGCAGACTACAA 399 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || |||||||| || | ||| | || | ||| | || || ||| Sbjct 398 TATCCAGAAAGAGTCTACTCTTCATCTTGTCCTCAGGCTCCGTGGTGGA 350 >seq22151 Length=46047 Score = 86.0 bits (94), Expect = 4e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 23704 GACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAA 23763 ||||||||||| |||| || || || ||| | |||| ||||| || ||||| ||||| Sbjct 13859 GACAAAGAAGGGATACCTCCTGACCAGCAGAGACTAATTTTTGCTGGAAAACAGTTGGAA 13918 Query 23764 GACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGTTTTA 23823 || | || ||| | | ||||||||||| || ||||| || ||| | || | ||||| Sbjct 13919 GATGGTCGAACTCTGGCTGATTACAACATCCAGAAAGAATCAACACTTCACCTGGTTTTG 13978 Query 23824 AGGTTGCGAGGAGGA 23838 ||| || | |||||| Sbjct 13979 AGGCTGAGGGGAGGA 13993 >seq12531 Length=12345 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || || || ||||| ||||| | || || || | | Sbjct 12142 ATGCAGATCTTCGTGAAGACTCTGACCGGGAAAACTATCACATTGGAGGTGGAGAGCTCA 12083 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 || ||| |||| ||| | ||| |||||| | || || ||||| | || |||||||| Sbjct 12082 GATACTATTGACAATGTGAAAGCAAAAA-TACAAGATAAGGAAGGGATTCCACCAGATCA 12024 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||| | | || || ||||| || || || || || | ||||| | | || ||||| Sbjct 12023 ACAGAGGCTCATCTTCGCCGGTAAGCAGCTTGAGGATGGGCGCACCCTTGCAGACTACAA 11964 Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGGA 23838 || || |||||||| || | ||| | || | ||| | || || ||| Sbjct 11963 TATCCAGAAAGAGTCTACTCTTCATCTTGTCCTCAGGCTCCGTGGTGGA 11915 >seq18952 Length=42506 Score = 82.4 bits (90), Expect = 5e-11 Identities = 85/109 (78%), Gaps = 2/109 (2%) Strand=Plus/Plus Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667 ||||||||||| ||||| ||||| || ||||| || |||||||| ||||| ||||| || Sbjct 26473 AAAATGCAGATCTTCGTGAAAACTCTTACGGGGAAGACGATCACGCTCGAGGTTGAATCT 26532 Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGT 23715 | ||||| |||| ||| | ||| | || ||| |||||||||||| Sbjct 26533 AGCGACACCATTGACAATGTCAAAGC-TAAGATTCAAGACAAAGAAGGT 26580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337870060447484