Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq24416 96.9 3e-15 >seq24416 Length=70076 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 101024 CTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAA 101083 || ||||| | || | || ||||| || |||||||||||||| |||| ||| | | Sbjct 31802 CTCAACACAAGATGAAGGGTCGATTCCTTCTGAATATTGTAATCAGCCAGTGTTCTTCCA 31743 Query 101084 TCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTG 101143 |||||||| || || || ||| | || | |||||| |||||| || | ||||||||| Sbjct 31742 TCTTCCAACTGCTTACCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATACCTTCTTTG 31683 Query 101144 TCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTT--GTTTCGACGGTAA 101201 || ||| || || |||| | | | || || | | || || ||| | ||||| Sbjct 31682 TCCTGAATCTTGGCCTTAACATTGTCAATGGTGTC-GAGAACTTTCCACTTCAAGGGTAA 31624 Query 101202 TAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 |||| ||||| ||||| || || | ||| |||||||| Sbjct 31623 TAGTCTTGCCAGTCAAGGTCTTCACAAAGATTTGCAT 31587 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409491680884107