Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq24612 161 8e-35 >seq24612 Length=73035 Score = 161 bits (178), Expect = 8e-35 Identities = 398/596 (67%), Gaps = 11/596 (2%) Strand=Plus/Plus Query 4545 AAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTT 4604 || |||||||||||||| ||||||||||||||||| ||||| || || || || ||| Sbjct 59404 AAGCACGCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATCAACTCATTCGAGAAAGTT 59463 Query 4605 AATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATAT--AGCGGCAAATGACCCAGAAA 4662 |||||||||||||| || | |||||| | ||||||||| | | | || | || |||| Sbjct 59464 AATCCGGGCATTAACCCCCGCTTTTTCAACCAAAATATTGAACAGAAACT--TCCGGAAA 59521 Query 4663 AGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGCTTTGT 4722 |||| || |||||||| ||||| || || || || ||| || | | | Sbjct 59522 AGAAAATCCCTTCTACACAAGCAAAAGCCACCAAACGCTCTGCGA---AGGTTTCAGAGC 59578 Query 4723 CTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAG 4782 | | ||||| | ||||| || || || || | ||| || || || || | || | Sbjct 59579 CATCGATCCAACGAAGGGCCCACTTCGCCTTCTTTTCAACACAAGGGATAGTCTCGATTG 59638 Query 4783 CGTTAAATAATTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTAT 4842 | || || |||| ||||| | ||| | || || | || | || | || | Sbjct 59639 CCCGGAACAACCTACTCTTTTCGTCAGAGTCCTTGATGTACGACTCCAACAGCAAACTGT 59698 Query 4843 ACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTA-AAAGCATCTAGCTTCT 4901 |||| || ||||| ||||| || || || || || ||||| || |||||| | || || Sbjct 59699 ACATCTCGGAATGGATATTCTCAATGGCGATTTGGAATCCATAGAAAGCA-CGCGCCTCA 59757 Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 | ||||| || || || || ||| | | | ||| || || || ||||| | Sbjct 59758 GCAACTTGGACATCTTTCATGAACCTTCCAGCGAGGTTCTCTAAAACGATGCCGTCTGAG 59817 Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTC 5021 || ||||||||||| | ||||||| || || | | ||| | | | || |||| | Sbjct 59818 GCAGCAAAAAACGCAAGCACATGAGTGATGAAATGCCTTTCACCGGATGTTAGGTTTTCC 59877 Query 5022 CAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCT 5081 || || | ||| || || ||| |||||||| | ||||| || || || ||| Sbjct 59878 CAATGACGAGTATCGGCAGATAGATCGACTTCTTCTGCCGTCCAGAAAGATGCCATAGCT 59937 Query 5082 TTTTTGTACATAGACCAAATATCAGGATACTGAATCGGAAGTATGACA-AATCTGT 5136 || |||||||| |||||| | || |||||||| || | || ||| ||||||| Sbjct 59938 TTCTTGTACATTTCCCAAATTTGTGGGTACTGAATTGGGAACAT-ACAGAATCTGT 59992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426873302314709