Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq24612 138 2e-27 seq22878 118 2e-21 seq24630 113 6e-20 >seq24612 Length=73035 Score = 138 bits (152), Expect = 2e-27 Identities = 388/596 (65%), Gaps = 0/596 (0%) Strand=Plus/Plus Query 46627 AAACATGCAAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTG 46686 || || ||||||||||| || | ||||| ||||| ||| || || || || || || Sbjct 59404 AAGCACGCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATCAACTCATTCGAGAAAGTT 59463 Query 46687 AGCCCAGGCATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAG 46746 | || ||||||| || |||||||| | ||||||||| | |||| ||| |||||| Sbjct 59464 AATCCGGGCATTAACCCCCGCTTTTTCAACCAAAATATTGAACAGAAACTTCCGGAAAAG 59523 Query 46747 AATATGCCTTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTATGA 46806 || || ||||||||| || || || || | | |||| || | | || || Sbjct 59524 AAAATCCCTTCTACACAAGCAAAAGCCACCAAACGCTCTGCGAAGGTTTCAGAGCCATCG 59583 Query 46807 ATCCACCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTA 46866 ||||| | | ||||| | ||||| || | |||||||| || || || || || Sbjct 59584 ATCCAACGAAGGGCCCACTTCGCCTTCTTTTCAACACAAGGGATAGTCTCGATTGCCCGG 59643 Query 46867 AAGAGAAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATT 46926 || | | ||||| ||| || || | || | || | | | ||| ||||| Sbjct 59644 AACAACCTACTCTTTTCGTCAGAGTCCTTGATGTACGACTCCAACAGCAAACTGTACATC 59703 Query 46927 TCTGAATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATC 46986 || ||||| || || ||||| || || || ||||| || ||| | || |||| || Sbjct 59704 TCGGAATGGATATTCTCAATGGCGATTTGGAATCCATAGAAAGCACGCGCCTCAGCAACT 59763 Query 46987 TGTACCTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCA 47046 || || ||| | || | | ||| | ||||| || || || || |||||| Sbjct 59764 TGGACATCTTTCATGAACCTTCCAGCGAGGTTCTCTAAAACGATGCCGTCTGAGGCAGCA 59823 Query 47047 AAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGTTTATTCCAGTCA 47106 ||||| || | ||||| | || |||| ||||| ||| || || || | ||| | | Sbjct 59824 AAAAACGCAAGCACATGAGTGATGAAATGCCTTTCACCGGATGTTAGGTTTTCCCAATGA 59883 Query 47107 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTA 47166 |||| |||| ||| |||||||| || |||||||| || ||| ||||| || Sbjct 59884 CGAGTATCGGCAGATAGATCGACTTCTTCTGCCGTCCAGAAAGATGCCATAGCTTTCTTG 59943 Query 47167 TACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCTATTTGGATT 47222 ||||| | ||| || | | || || || || || ||| ||||| | ||| || Sbjct 59944 TACATTTCCCAAATTTGTGGGTACTGAATTGGGAACATACAGAATCTGTCTGGGTT 59999 >seq22878 Length=52695 Score = 118 bits (130), Expect = 2e-21 Identities = 160/223 (72%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 76753 ACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCC 76812 |||||| || || | ||||| ||||||| |||| | || | | ||| |||||||| || Sbjct 22387 ACCTCCTTGGTCAACATATCGAGCAGTGTCATTAAACACACGTAGCATCGGAATAATTCC 22328 Query 76813 GTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCACGAATATTACTAATAGA 76872 || ||||| |||||||||||| ||||||||| ||| |||||||||| | || Sbjct 22327 ATTTGATGTCCCATTTGTTCCACGAATATAACTCCCAGTACCACGAATATTGTGCACCGA 22268 Query 76873 TAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGAT 76932 | || |||||||| || |||| || | |||||| || | || ||||| || Sbjct 22267 AACTCCAATTCCTCCAGCAGATTTACTAATAACAGCACACTCCTTAAGAGTATCATATAT 22208 Query 76933 GCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTA 76975 |||||| ||||||||||| ||||| | || || |||||| Sbjct 22207 GCCCTCAATACTATCATCTTTCATGCATATCAGGAAGCAGCTA 22165 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 |||||| |||||||| | || ||||| ||||||||||||||| ||| ||| | | || Sbjct 22064 AGTTCCAGCATTAAAAAGAGTTGGAGAAGCATGAGTGAACCATCTTTGAGACATCAAATG 22005 Query 77053 GTATGTTTCAATAACTGCTTCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAA 77112 || || | || | | ||| ||||| || || || || |||| ||| ||||||| Sbjct 22004 ATAAGTCTTGATGGCAGATTCAATATCATCTTTGTGGATCCCAACAGAGACTCGCATCAG 21945 Query 77113 CATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 77172 |||||| || || | ||||||| || || || || || | ||| || |||| Sbjct 21944 CATATGTTGTGGCCTTTCTACAACTTTTCCATCAATCTTTAAGAGGTAAGACCGCTCCAG 21885 Query 77173 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||||| |||||||| || | || |||||| || || || || || Sbjct 21884 GGTTTTGAAACCAAAGTAATCATAGTCAAAGTCCCTGTCATATATGAT 21837 Score = 87.8 bits (96), Expect = 3e-12 Identities = 124/172 (72%), Gaps = 2/172 (1%) Strand=Plus/Minus Query 76492 CTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAACC 76551 |||||||||||| | |||||| | | ||||| || || ||||| ||| |||| || Sbjct 22899 CTCTCTTTCATACTTTGTATACAGCTTCTCAAAATCTTCACCCCAGCAATCTGCCAATCC 22840 Query 76552 AGGACATTCATTCGGACACATCAATGACCACTCACCATCTTCCTT-AACCCGTTTCATAA 76610 |||| |||||| ||||| | || ||||| | || | | | || || | || ||||| Sbjct 22839 AGGAGCTTCATTTGGACAAAATAAAGACCATTGTCCGT-TGCTTTGGACTCTTTCCATAA 22781 Query 76611 AGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTC 76662 | |||||||| | ||| |||||| || |||||||||| | | | ||||| Sbjct 22780 AAAGATCAGGCACCCAAAGAGCATAGAAAAGATCTCGGGCCCGATGCTCTTC 22729 >seq24630 Length=73539 Score = 113 bits (124), Expect = 6e-20 Identities = 169/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 76736 ACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATAAACTCTC 76795 |||||| || ||| || || || || | |||||||||||| | |||| | || | | Sbjct 28049 ACACCCTTTCTTTTGCCGCCCCCTTGGTCAACATATCTGGCAGTATCATTAAATACACGC 27990 Query 76796 AACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCCACATGCA 76855 | ||| || | ||| || || ||||| |||||||||||| ||| ||||| ||| ||| Sbjct 27989 AGCATAGGCACAATTCCATTTGATGTTCCATTTGTTCCACGAATGTAACTCCCAGTAGCA 27930 Query 76856 CGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGCACAGCGT 76915 || || || | ||||| || ||||| || || ||| || | |||||| Sbjct 27929 CGTATGTTGTGCACAGATACACCAATTCCCCCAGCTGATTTGCTAATAACAGCACATTCC 27870 Query 76916 TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAAAACAGCTA 76975 || | |||||||| |||||||| |||||||||||| ||||| | || || |||||| Sbjct 27869 TTAAGAGTGTCATATATGCCCTCAATACTATCATCCTTCATGCATATCAGGAAGCAGCTA 27810 Score = 95.1 bits (104), Expect = 2e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 76993 AGTTCCTGCATTAAACAATGTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATT 77052 ||| || |||||||||| || |||||||||||||||||||| || ||| | | || Sbjct 27519 AGTGCCAGCATTAAACAGCGTTGGAGATGCATGAGTGAACCAGCGTTGAGACATCAAATG 27460 Query 77053 GTATGTTTCAATAACTGCTTCTATATCC-CATTGATGAATTCCTACAGCGACACGCATCA 77111 ||||| | || | | ||| |||||| | ||| || ||||| |||| || | ||||| Sbjct 27459 ATATGTCTTGATGGCAGATTCAATATCCTCCTTG-TGGATTCCAACAGATACTCTCATCA 27401 Query 77112 ACATATGCTGAGGTCGTTCTACAGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCA 77171 ||| || || || | ||||||| | || | || || || | ||| || | || | Sbjct 27400 GCATGTGTTGTGGCCTTTCTACAATTTTTCCCTGAATCTTTAAAAGGTAAGACCTCTCAA 27341 Query 77172 AAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAAT 77220 ||||| |||||||| || | || ||||||||| || || || || Sbjct 27340 GGGTTTTGAAACCAAAGTAATCATAGTCAAAGTCTCTGTCATATATGAT 27292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712632534663360