Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20melongena_20[genbank_20GCA_5F000787875.1_202014-09-30] 33,873 sequences; 833,080,760 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq24612 176 5e-39 seq23788 82.4 8e-11 >seq24612 Length=73035 Score = 176 bits (194), Expect = 5e-39 Identities = 376/559 (67%), Gaps = 7/559 (1%) Strand=Plus/Plus Query 23506 AAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTT 23565 || || ||||||||||| || | ||||| || || |||||| ||||| || || ||| Sbjct 59404 AAGCACGCAAAATCACAGTGCAAACCTTCGTCTCTTGAAATCAACTCATTCGAGAAAGTT 59463 Query 23566 AATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTG--CAGCAAATGATCCGGAAA 23623 ||||| |||||||| || || ||||| | ||||||||||| ||| || | |||||||| Sbjct 59464 AATCCGGGCATTAACCCCCGCTTTTTCAACCAAAATATTGAACAGAAACT--TCCGGAAA 59521 Query 23624 AGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGTTGCATTATAAT 23683 ||||||| || || ||| ||||| ||||| | ||| | || ||| | | | Sbjct 59522 AGAAAATCCCTTCTACACAAGCAAAAGCCACCAAACGCTCTGCGAAGGTT---TCAGAGC 59578 Query 23684 CAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAATTGTTTCAATTG 23743 || ||||| | ||| || |||||| || ||||| || || || |||| Sbjct 59579 CATCGATCCAACGAAGGGCCCACTTCGCCTTCTTTTCAACACAAGGGATAGTCTCGATTG 59638 Query 23744 CTTTTAAGAGAAAAGTTTTTTCTTCATTATCTGTTATATATGTATCAATTAGTAAACTAT 23803 | || | | | ||||| ||| || | || || | || | || ||||| | Sbjct 59639 CCCGGAACAACCTACTCTTTTCGTCAGAGTCCTTGATGTACGACTCCAACAGCAAACTGT 59698 Query 23804 ACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAG 23863 |||| || ||||| ||||| ||||| || || || || ||||| ||| | || |||| Sbjct 59699 ACATCTCGGAATGGATATTCTCAATGGCGATTTGGAATCCATAGAAAGCACGCGCCTCAG 59758 Query 23864 ACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAG 23923 | ||| ||||| || | || ||| ||| | || || ||| || || || | Sbjct 59759 CAACTTGGACATCTTTCATGAACCTTCCAGCGAGGTTCTCTAAAACGATGCCGTCTGAGG 59818 Query 23924 CAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCC 23983 ||||||| || ||||| |||| | || ||||| |||||| | | || || |||| || Sbjct 59819 CAGCAAAAAACGCAAGCACATGAGTGATGAAATGCCTTTCACCGGATGTTAGGTTTTCCC 59878 Query 23984 AATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTGCCAAGGCAC 24043 ||| | | |||| |||| ||| ||||| || | ||||| ||| ||||| || Sbjct 59879 AATGACGAGTATCGGCAGATAGATCGACTTCTTCTGCCGTCCAGAAAGATGCCATAGCTT 59938 Query 24044 GCTTATACATTAGCCAAAT 24062 ||| |||||| |||||| Sbjct 59939 TCTTGTACATTTCCCAAAT 59957 >seq23788 Length=158121 Score = 82.4 bits (90), Expect = 8e-11 Identities = 93/123 (76%), Gaps = 4/123 (3%) Strand=Plus/Plus Query 23509 CATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTCATTAGAAAATGTTAAT 23568 || ||||| ||||| || || |||||||||||| ||| | ||||| ||||| || ||| Sbjct 101503 CAAGCAAAGTCACAGTGGAGACCTTCATCCCTAGAAATGAGCTCATTTGAAAAAGTCAAT 101562 Query 23569 CCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAA 23628 |||||||| || || | ||||| | |||||| || ||| |||| | | || || ||| Sbjct 101563 CCTGGCATCAACCCCCTCTTTTTCAGCCAAAAGATAGCA-CAAAAGCTGCG---AACAAA 101618 Query 23629 ATA 23631 ||| Sbjct 101619 ATA 101621 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 521267195462200