Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pennellii_20[refseq_20GCF_5F001406875.1_202014-07-11] 12 sequences; 926,426,464 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq10 87.8 1e-12 >seq10 Length=82529941 Score = 87.8 bits (96), Expect = 1e-12 Identities = 108/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Plus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||| || |||| || ||| |||||||| || ||||||||||| |||||||| || Sbjct 1141356 ACCTCCCCTGAGCCTCAACACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAATCGGC 1141415 Query 33960 CAATTGTCGCT-CGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 || |||| | | || ||||| |||||||| |||||||||| | ||||| || | Sbjct 1141416 TAA-TGTCCTTCCATCTTCCAACTGCTTGCCAGCAAATATCAACCTTTGCTGGTCTGGTG 1141474 Query 34019 GCACGCTCTCTTTGTCCATAATTTT 34043 | | | |||||||||| ||| || Sbjct 1141475 GGATACCCTCTTTGTCCTGAATCTT 1141499 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397062341929624