Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pennellii_20[refseq_20GCF_5F001406875.1_202014-07-11] 12 sequences; 926,426,464 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq2 86.0 7e-12 >seq2 Length=59803892 Score = 86.0 bits (94), Expect = 7e-12 Identities = 220/333 (66%), Gaps = 14/333 (4%) Strand=Plus/Plus Query 8629 CGGCACATTGGCTCGTGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTA 8688 |||| |||||| | | ||||||||| ||| | || || | || |||||| || | Sbjct 51387540 CGGCGCATTGGTACACGGTGAATTACCGGGAAGCGTACGGGATATTCGCGTGCAATGGGA 51387599 Query 8689 TTCTCTTCAACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACC- 8747 ||||||||||||||||||| || ||||| || | |||||||||| | |||||| ||| Sbjct 51387600 TTCTCTTCAACCACGAGTCTCCTCGTCGGGGTGAGAATTTCGTGACGAGGAAGATTACCC 51387659 Query 8748 -----GATGGTATCAAACAAATCGTCGCGGGT-GAGAGGGAGTTCATTGAATTGGGGAAC 8801 | || | | | |||||| || | |||| || | || ||||| || Sbjct 51387660 GGGCTGTAGGGAGGATAAAAATCG----GGCTACAGAGCAAGGTTTTT---TTGGGTAAT 51387712 Query 8802 CTCAACGCCGAGAGGGACTGGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTA 8861 | | || ||||||||||| || |||||||| ||||| |||||| | | Sbjct 51387713 TTACAGGCGTCAAGGGACTGGGGCTTTGCTGGAGACTATGTAGAAGCAATGTGGATGATG 51387772 Query 8862 CTTCAACAAGAAGAGGCGGACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGG 8921 || || ||||| | | ||||| || || || || |||| ||| |||| | || | Sbjct 51387773 CTGCAGCAAGAGAAACCAGACGACTACGTTGTGGCAACGGAGGATTCACATACTGTAGAG 51387832 Query 8922 GAGTTCGTTGAGTTGTGCTTTAGGGAAGTTGGA 8954 ||||| | || | |||||| | |||||| Sbjct 51387833 GAGTTTCTAGAAGTAGCATTTAGGTACGTTGGA 51387865 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597353510396960