Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pennellii_20[refseq_20GCF_5F001406875.1_202014-07-11] 12 sequences; 926,426,464 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq12 149 1e-30 seq10 147 5e-30 seq7 143 6e-29 seq1 138 3e-27 seq11 131 4e-25 >seq12 Length=83305730 Score = 149 bits (164), Expect = 1e-30 Identities = 164/218 (75%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||||||||| || |||||||| |||| |||||||||||| | || | ||||| Sbjct 82214199 AGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCC 82214258 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| |||||||| || | ||||||||||| || ||| ||||| || Sbjct 82214259 TCGAGCTGCTTACCGGCGAAAATCAATCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCT 82214318 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || || | |||||||| || ||||| || || || || ||| Sbjct 82214319 TGAATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTC 82214378 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || ||||| || || |||||||| || || |||||| Sbjct 82214379 TTGCCCGTCAGGGTCTTCACAAAGATCTG---CATTTT 82214413 Score = 140 bits (154), Expect = 8e-28 Identities = 162/218 (74%), Gaps = 3/218 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||| || || ||||| |||| |||||||||||| | || | ||||| Sbjct 82262375 AGCACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCC 82262316 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| ||||| || | | ||||||||| || ||| ||||| ||| Sbjct 82262315 TCAAGCTGCTTTCCTGCGAAAATCAACCTCTGCTGGTCTGGTGGAATGCCTTCCTTGTCC 82262256 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || || | |||||||| || ||||| || || || || ||| Sbjct 82262255 TGAATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCTAAGGTAATAGTC 82262196 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTT 199635 || ||||| || || |||||||| || || |||||| Sbjct 82262195 TTGCCCGTTAGGGTCTTCACAAAGATCTG---CATTTT 82262161 >seq10 Length=82529941 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| | ||| ||||||||||||| ||||||||| |||| ||||||||||||| Sbjct 1141144 AGGACAAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCT 1141203 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || || ||||| || | |||||||||| | ||||| || ||| Sbjct 1141204 TCAAGCTGCTTCCCTGCAAAGATCAGTCTCTGCTGGTCCTGTGGGATTCCCTCCTTGTCC 1141263 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| || | ||| || | | || || ||||| || || || Sbjct 1141264 TGAATCTTAGCCTTCACATTGTCAATGGTATCAGAACTCTCCACCTCCAAAGTTATGGTT 1141323 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || ||||||||||| || Sbjct 1141324 TTCCCAGTCAAGGTCTTCACAAAAATCTG 1141352 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| | ||| || || |||||||| |||| |||||| ||||| | ||| Sbjct 1141819 CGAAGACGAAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTC 1141878 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||||||||| ||||| | | ||||||||| || ||| ||| Sbjct 1141879 CGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAATCTCTGCTGGTCTGGGGGAATGCCT 1141938 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || || || | |||||| | |||| || || | Sbjct 1141939 TCCTTGTCCTGGATCTTGGCTTTAACATTGTCAATGGTGTCGGAGCTTTCAACCTCAAGG 1141998 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | ||| ||||| |||||||| Sbjct 1141999 GTGATGGTCTTTCCTGTCAAAGTCTTCACGAAAATTTG 1142036 Score = 120 bits (132), Expect = 7e-22 Identities = 158/219 (72%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 199408 TCGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGT 199467 ||| || | |||||| | ||| || || |||||||| |||| |||||| ||||| | || Sbjct 1141590 TCGGAGACGCAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGT 1141649 Query 199468 CCTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC 199527 | || || || |||||||||||||| ||||| | | ||||||||| || ||| || Sbjct 1141650 ACGACCGTCCTCAAGCTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACC 1141709 Query 199528 TTCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 |||| |||||||| || ||| || || | |||||| | |||| || || | Sbjct 1141710 TTCTTTGTCCTGAATTTTAGCCTTAACATTGTCAATGGTGTCAGAACTTTCCACCTCAAG 1141769 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || | || |||||||| ||||| Sbjct 1141770 GGTGATTGTCTTGCCAGTCAAGGTCTTCACAAAGATTTG 1141808 Score = 118 bits (130), Expect = 2e-21 Identities = 157/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || | ||| ||||| ||||||||||| | |||||| || || | || Sbjct 1142275 CGAAGACGGAGCACCAAGTGAAGAGTGGACTCCTTTTGAATGTTGTAATCGGCGAGGGTA 1142334 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| |||||||| || || ||||| || | ||||||||| || ||| ||| Sbjct 1142335 CGGCCATCTTCAAGCTGCTTGCCCGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCT 1142394 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| ||||| || || || | |||||||| |||| || || | Sbjct 1142395 TCCTTGTCCTGGATCTTGGCTTTGACATTGTCAATGGTGTCTGAGCTTTCCACCTCAAGG 1142454 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||| ||||| ||||| || || Sbjct 1142455 GTGATGGTCTTTCCAGTGAGGGTTTTGACAAATATCTG 1142492 Score = 100 bits (110), Expect = 7e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || |||| ||||| || || || || ||||| || | ||||| || || || |||||| Sbjct 1141366 AGCCTCAACACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAATCGGCTAATGTCCTT 1141425 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 |||||||||| |||||| || || || || | | |||||||| || || || ||| Sbjct 1141426 CCATCTTCCAACTGCTTGCCAGCAAATATCAACCTTTGCTGGTCTGGTGGGATACCCTCT 1141485 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||||||||| ||| ||| || | |||||| | |||| || || | || Sbjct 1141486 TTGTCCTGAATCTTGGCCTTTACGTTGTCAATGGTGTCAGAACTTTCCACCTCAAGGGTA 1141545 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || | || ||||| || ||||| Sbjct 1141546 ATAGTCTTGCCAGTCAAGGTCTTCACGAAGATTTG 1141580 Score = 91.5 bits (100), Expect = 3e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993 ||| || || || ||||| || ||||||||||| || || |||| ||||||||| | || Sbjct 500412 ACTGATTTTTGCTGGAAAACAATTGGAAGATGGTAGAACCCTGGCTGATTACAACATTCA 500353 Query 200994 GAAAGAGTCTACTCTTCACCTTGTTTTGAGACT 201026 |||||| || ||||||||||||||| |||| || Sbjct 500352 GAAAGAATCAACTCTTCACCTTGTTCTGAGGCT 500320 Score = 89.7 bits (98), Expect = 1e-12 Identities = 70/84 (83%), Gaps = 0/84 (0%) Strand=Plus/Minus Query 200934 ACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCA 200993 ||| ||||| || || |||||| | ||||||||||||||| |||| || |||||| |||| Sbjct 1141230 ACTGATCTTTGCAGGGAAGCAGCTTGAAGATGGAAGGACTCTGGCGGACTACAACATCCA 1141171 Query 200994 GAAAGAGTCTACTCTTCACCTTGT 201017 || ||||||||| | |||||||| Sbjct 1141170 AAAGGAGTCTACTTTGCACCTTGT 1141147 Score = 89.7 bits (98), Expect = 1e-12 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 || || || || ||||||||||||||||||||||| || ||||||||||| | ||||| Sbjct 1141454 ATATTTGCTGGCAAGCAGTTGGAAGATGGAAGGACATTAGCCGATTACAATATTCAGAAG 1141395 Query 200998 GAGTCTACTCTTCACCTTGTTTTGAGACT 201026 || || || ||||| ||||| ||||| || Sbjct 1141394 GAATCAACCCTTCATCTTGTGTTGAGGCT 1141366 >seq7 Length=79292169 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 |||||||| ||||| || |||||||| |||| |||||||||||| | || | ||||| Sbjct 77535932 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTGCGGCCATCC 77535873 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||| | | ||||||||| || |||||||| ||| Sbjct 77535872 TCGAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGGATTCCTTCCTTATCC 77535813 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||||| || | |||||| | |||| || ||||| ||||| ||| Sbjct 77535812 TGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTC 77535753 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || || || Sbjct 77535752 TTTCCGGTAAGAGTCTTAACGAAGATCTG 77535724 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || ||||||||||| |||| ||||||||| || | || | || || Sbjct 77536160 AGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGACCGTCC 77536101 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| | | ||||||||| || |||||| || ||| Sbjct 77536100 TCGAGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCC 77536041 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| |||||| || | |||||| | ||||||| ||||| ||||| ||| Sbjct 77536040 TGGATCTTAGCCTTCACATTATCAATGGTGTCGGAGCTTTCTACCTCCAAAGTGATGGTC 77535981 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || |||||||| || Sbjct 77535980 TTTCCGGTGAGGGTCTTAACAAAAATCTG 77535952 Score = 140 bits (154), Expect = 8e-28 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| || |||||||| |||| |||||| ||||| | ||| | ||| || |||| |||| Sbjct 77535467 TGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGCTAGAGTACGTCCGTCCTCCAACTGC 77535408 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 |||||||||||||| || | ||||| ||||| ||||||||| ||||| ||||| Sbjct 77535407 TTTCCGGCGAAGATAAGCCTTTGCTGATCCGGGGGAATTCCTTCCTTATCCTGGATCTTA 77535348 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| |||| || || | |||| || || | ||||| ||||| || ||| Sbjct 77535347 GCCTTAACGTTGTCGATTGTATCAGAACTTTCCACCTCTAGGGTGATAGTCTTTCCGGTG 77535288 Query 199607 AGAGTTTTCACAAAAATTTG 199626 |||||||||||||| || || Sbjct 77535287 AGAGTTTTCACAAAGATCTG 77535268 Score = 131 bits (144), Expect = 4e-25 Identities = 149/200 (75%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 ||||| || |||||||| |||| ||||||||||| | || | |||||||||| |||| Sbjct 77535695 TGGAGGGTGGACTCCTTCTGGATATTGTAGTCAGCTAGGGTGCGGCCATCTTCCAACTGC 77535636 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || ||||| | | ||||||||| || ||| ||||| ||||| ||||| Sbjct 77535635 TTTCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCCTGGATCTTA 77535576 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| ||| || | |||||||| |||| || || | || |||||||||||||| Sbjct 77535575 GCCTTGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCAAGGGTAATCGTCTTACCCGTA 77535516 Query 199607 AGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || || Sbjct 77535515 AGAGTCTTCACGAAGATCTG 77535496 Score = 120 bits (132), Expect = 7e-22 Identities = 152/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| ||||| |||||||| |||| ||||||||||| | || | ||||| Sbjct 77536616 AGGACAAGGTGCAGAGTAGACTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGGCCATCC 77536557 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || |||||||| | | ||||||||| || || || || ||| Sbjct 77536556 TCAAGCTGCTTACCAGCGAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCC 77536497 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||||| |||| ||||| | | || || ||||| ||||| ||| Sbjct 77536496 TGAATCTTAGCTTTCACATTGTCGATAGTGTCAGAACTCTCCACCTCCAAAGTGATGGTC 77536437 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || |||||||| || || Sbjct 77536436 TTCCCGGTCAAGGTCTTCACAAAGATCTG 77536408 Score = 109 bits (120), Expect = 1e-18 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 || || || || | ||| || |||||||||||||||| ||||||||| |||||||| | Sbjct 77536394 AGCCTAAGCACCAAGTGCAGGGTCGACTCCTTTTGGATGTTGTAGTCCGCCAAAGTGCGG 77536335 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| || |||||||| || || || || | | |||||| || || ||| || || Sbjct 77536334 CCATCCTCGAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGATCTGGGGGAATACCCTCC 77536275 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 || || ||||| ||| || |||| |||||| | | || || |||| ||| Sbjct 77536274 TTGTCTTGGATCTTGGCCTTGACATTGTCGATGGTGTCGGAGCTCTCAACCTCCAGGGTG 77536215 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || || ||||| ||||| Sbjct 77536214 ATGGTTTTCCCGGTAAGGGTCTTAACAAAGATTTG 77536180 Score = 89.7 bits (98), Expect = 1e-12 Identities = 66/77 (86%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 200935 CTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAG 200994 |||||||||||||||||||||||||| || ||| | ||| | || ||||||||| ||||| Sbjct 77535391 CTTATCTTCGCCGGAAAGCAGTTGGAGGACGGACGTACTCTAGCTGATTACAACATCCAG 77535450 Query 200995 AAAGAGTCTACTCTTCA 201011 || |||||||| || || Sbjct 77535451 AAGGAGTCTACCCTCCA 77535467 >seq1 Length=109333515 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || |||||||| |||||||| |||| ||||||||| || | ||| | ||||| Sbjct 87072277 AGCACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTACGACCATCC 87072336 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||||||||| || | |||||||||||| || ||| ||||| ||| Sbjct 87072337 TCAAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCC 87072396 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || |||| |||||| | | || || || | ||||||||| Sbjct 87072397 TGGATCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTGATCGTC 87072456 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || |||||||| || || || Sbjct 87072457 TTCCCCGTTAGGGTTTTCACGAAGATCTG 87072485 Score = 131 bits (144), Expect = 4e-25 Identities = 150/200 (75%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 199440 CCTTT-TGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTTTCCGGCGAAG 199498 ||||| || | |||||| ||||| | ||| | ||||||||| |||||||||||||||||| Sbjct 97684338 CCTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAG 97684279 Query 199499 ATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTTGCTTCACGGAT 199558 || | |||||||||||||| ||| ||||| || |||||||| || || Sbjct 97684278 ATCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTG 97684219 Query 199559 TCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGAGAGTTTTCACA 199618 || | ||||| | | ||| || || | |||||||||||| ||||| ||||||||||| Sbjct 97684218 TCAATAGTGTCGCTCGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACG 97684159 Query 199619 AAAATTTGGTACATTTTAGC 199638 || || || |||||| || Sbjct 97684158 AAGATCTG---CATTTTGGC 97684142 >seq11 Length=66223686 Score = 131 bits (144), Expect = 4e-25 Identities = 162/219 (74%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||||||||| || || ||||||||||||| |||||| ||||| | || Sbjct 535286 CGAAGGCGAAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGCAAGTGTT 535227 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| ||||| || || || ||||| || | ||||||||| || ||| ||| Sbjct 535226 CGGCCATCTTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCT 535167 Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 || || ||||| ||| || || || |||| |||||||| | || || || | Sbjct 535166 TCCTTGTCTTGAAT-TTTAGCTTTGACATTATCGATGGTGTCTGAGCTCTCGACCTCAAG 535108 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || |||||||| ||||| ||||| Sbjct 535107 AGTTATAGTCTTCCCGGTCAGAGTTTTAACAAAGATTTG 535069 Score = 122 bits (134), Expect = 2e-22 Identities = 156/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| || ||||| || | || ||||| || || | ||||||||||||| |||||| Sbjct 535511 AGTCGAAGAACAAGATGTAAGGTAGACTCTTTCTGAATATTGTAGTCAGCCAGGGTCCTT 535452 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||| || || ||||| ||||| ||||| || | ||||||||| ||| ||| ||||| Sbjct 535451 CCATCCTCAAGTTGCTTGCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGAATCCCTTCC 535392 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 |||||||| || ||||||| || | ||| || | |||| || || | ||| Sbjct 535391 TTATCCTGAATTTTGGCCTTCACGTTGTCAATGGTATCGGAACTTTCAACTTCAAGGGTG 535332 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || || ||||| || || Sbjct 535331 ATGGTCTTTCCAGTAAGTGTCTTGACAAAGATCTG 535297 Score = 118 bits (130), Expect = 2e-21 Identities = 156/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||||||||| || || ||||||||| ||| |||||| ||||| | || | |||||| Sbjct 522890 AGGACAAGGTGAAGGGTGGACTCCTTTAGGATGTTGTAATCAGCAAGTGTTCGGCCATCT 522949 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCC-TTCTCGCTC 199536 || ||||| || || || ||||| || | ||||||||| || |||| || |||| | || Sbjct 522950 TCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGAAATACCTTTCTTG-TC 523008 Query 199537 CTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595 | ||| ||| || || || || | |||||||| | || || || | || || | Sbjct 523009 TTCAAT-TTTAGCTTTGACATTATCAATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAG 523067 Query 199596 TCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||| || || |||||||| ||||| ||||| Sbjct 523068 TCTTTCCGGTCAGAGTTTTAACAAAGATTTG 523098 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || ||||||||||| || ||||| ||||| || |||| ||| ||||| || | || Sbjct 536198 CGGAGCCTCAGGACAAGATGCAGAGTAGACTCTTTCTGGATGTTATAGTCTGCAAGGGTG 536139 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||||| || |||||||| || || |||||||| | ||| || || || || ||| Sbjct 536138 CGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGCCTCTGTTGATCTGGTGGGATCCCT 536079 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||| |||||| ||||| || | || || | | || || ||||| Sbjct 536078 TCCTTGTCCTGTATCTTTGCTTTCACATTGTCAATAGTATCAGAGCTCTCCACCTCCAAT 536019 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || || ||||| |||||||| || || Sbjct 536018 GTGATTGTCTTCCCAGTCAGAGTCTTCACAAAGATCTG 535981 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| || || || || || || | |||||| || ||||| ||||||||||| Sbjct 535733 AGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCCAACGTCCTTCCATCC 535674 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || |||||||| || ||||| | | ||||||||| ||| ||| || || || Sbjct 535673 TCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCT 535614 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || |||||| || || |||| ||| |||| | || || ||||| || || ||| Sbjct 535613 TGGATCTTTGCTTTAACATTGTCGATGGTATCTGAACTCTCAACCTCCAAAGTAATTGTC 535554 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || | || || ||||| ||||| Sbjct 535553 TTCCCTGTCAATGTCTTGACAAATATTTG 535525 Score = 91.5 bits (100), Expect = 3e-13 Identities = 147/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| || || |||| || || | |||||| || ||||| |||||||||||| Sbjct 522442 AGAACAAGGTGCAGGGTTGACTGTTTCTGAATGTTGTAATCTGCCAAGGTCCTTCCATCT 522501 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAAT-TCCTTCTCGCTC 199536 || || |||| ||| || || || | | |||||||| ||| ||| ||| || || Sbjct 522502 TCAAGTTGCTCTCCAGCAAATATCAATCTCTGCTGGTTTGGAGGAATACCCTCCTTTGTC 522561 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 || |||||| || || | || || |||| | || || ||||| || || || Sbjct 522562 TTGGATCTTTGCTTTAACATTGTTGATAGTATCTGAACTCTCAACCTCCAAAGTAATTGT 522621 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || | || || ||||| ||||| Sbjct 522622 CTTCCCTGTCAATGTCTTAACAAATATTTG 522651 Score = 87.8 bits (96), Expect = 4e-12 Identities = 146/209 (70%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || | || ||||| || || | ||||||||||||| ||||||||||| Sbjct 522671 AGAACAAGATGTAAGGTGGACTCTTTCTGAATATTGTAGTCAGCCAGGGTCCTTCCATCC 522730 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| |||| ||||| || | || |||||| || | ||||| ||| Sbjct 522731 TCAAGTTGCTTGCCGG-AAAGATCAGTCTCTTCTGGTCTAGAGGA--CCCTTCCTTATCC 522787 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 ||||| || ||||||| || | || |||| |||| || || | ||||| ||| Sbjct 522788 TGAATTTTGGCCTTCACGTTGTCAATTGTATCTGAACTTTCAACTTCAAGGGTGATGGTC 522847 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || | || ||||| || || Sbjct 522848 TTTCCAGTAAGTATCTTGACAAAGATCTG 522876 Score = 84.2 bits (92), Expect = 5e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 200938 ATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAA 200997 ||||| || |||||||| | || ||||||||||| ||||| ||||||||| | |||||| Sbjct 535651 ATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACGTTGGCAGATTACAACATTCAGAAA 535710 Query 200998 GAGTCTACTCTTCACCTTGTT 201018 || || || || ||||||||| Sbjct 535711 GAATCAACCCTGCACCTTGTT 535731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921418740804