Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pennellii_20[refseq_20GCF_5F001406875.1_202014-07-11] 12 sequences; 926,426,464 total letters Query= NC_016658.1 Length=47741 Score E Sequences producing significant alignments: (Bits) Value seq1 592 5e-165 seq2 430 4e-116 seq10 255 2e-63 seq7 82.4 2e-11 seq5 80.6 8e-11 >seq1 Length=109333515 Score = 592 bits (656), Expect = 5e-165 Identities = 726/989 (73%), Gaps = 4/989 (0%) Strand=Plus/Minus Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250 ||| ||||| || || |||||||| |||||||| ||||| ||||| |||||||||||||| Sbjct 12270844 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 12270785 Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGAC 5310 ||| |||||||| | || ||| ||||||||| || | | ||| | |||||| || Sbjct 12270784 GTTAGCACGGTTGATGATATCAGCCCAAGTGTTAATTACACGACCCTGACTGTCAACTAC 12270725 Query 5311 TGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 5370 || || ||||| || || || || || || |||||||||||| || || | || ||| Sbjct 12270724 AGATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTAATACCTAAAGCGGT 12270665 Query 5371 AAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTT 5430 || ||| || | || || ||||||| ||| |||||||| ||||| ||| ||||| Sbjct 12270664 AAACCAGATACCTACTACAGGCCAAGCAGCTAGGAAGAAGTGTAACGAACGAGAGTTGTT 12270605 Query 5431 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 5490 || |||||||| |||||||| | || ||||| || |||||||| || || || ||||| Sbjct 12270604 GAAACTAGCATATTGGAAGATCAATCGGCCAAAATAACCATGAGCGGCTACGATATTATA 12270545 Query 5491 CGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTC 5550 |||||||||||||| |||||| | || || | || ||| | | || ||||| Sbjct 12270544 AGTTTCTTCCTCTTGACCGAATCTGTAACCTTCATTAGCAGATTCATTTTCTGTGGTTTC 12270485 Query 5551 ACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAA 5610 | || | |||||| || | |||||||||||| ||| | | || ||||| Sbjct 12270484 CCTGATCAAACTAGAAGTTACCAAGGAACCATGCATAGCACTGAATAGGGAGCCGCCGAA 12270425 Query 5611 TACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAA 5670 ||||||||| || || | |||||| || || ||||||||||| |||||||| |||||||| Sbjct 12270424 TACCCCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTGTTCAGCCTGGAA 12270365 Query 5671 TACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCC 5730 ||| | ||| || || |||||||||||||| || ||||||||||||||| |||||||| Sbjct 12270364 TACAATCATGAAATTGAAAGTACCAGAGATTCCTAGAGGCATACCATCAGAAAAACTTCC 12270305 Query 5731 CTGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAATATGC 5790 || |||| ||||| | || || |||| | || || ||||| || ||||||||||| Sbjct 12270304 TTGACCGATTGGGTAGATCAAGAAAACTGCGGTAGCAGCTGCAACAGGAGCTGAATATGC 12270245 Query 5791 TACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCCAAGTA 5850 || |||||| |||||||| || | | | | ||||| ||||| | || |||| ||| Sbjct 12270244 AACAGCAATCCAAGGTCGCATACCCAGACGGAAGCTAAGCTCCCACTCACGACCCATGTA 12270185 Query 5851 AGCTGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATTGTAAAG 5910 | || | |||| | |||||| | || | |||| || || || || ||||| | Sbjct 12270184 ACAAGCTACGCCAAGTAAGAAGTGTAGAACAATTAGTTCATAAGGACCACCGTTGTATAA 12270125 Query 5911 CCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTG 5968 ||||||||| | ||| || ||||||||||| || || || ||||| || || || Sbjct 12270124 CCATTCATCAACGGAT--GCCGCTTCCCAGATTGGGTAAAAATGTAAACCTATAGCTGCA 12270067 Query 5969 GAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACG 6028 || | || | || ||| || || || ||||||||||| || |||||||| |||| || Sbjct 12270066 GAAGTAGGAATAATGGCACCGGAAATAATGTTGTTTCCGTAAAGTAGAGACCCTGAAACA 12270007 Query 6029 GGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAATGCA 6088 |||||||| || || || ||||| ||||| || ||||| | ||| || | |||||| || Sbjct 12270006 GGTTCACGAATACCATCAATGTCTACTGGAGGAGCAGCAATGAAGGCAATAATAAATACA 12269947 Query 6089 GTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAGAGGCGG 6148 | |||||| || || | | || ||||| || ||||||||||| || | || || ||| Sbjct 12269946 GAAGTTGCCGTCAATAAGGTAGGGATCATCAAAACACCAAACCATCCAATGTAAAGACGG 12269887 Query 6149 TTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 || | |||||||| | ||||| |||||| Sbjct 12269886 TTTTCAGTGCTAGTTATCCAGTTACAGAA 12269858 >seq2 Length=59803892 Score = 430 bits (476), Expect = 4e-116 Identities = 699/995 (70%), Gaps = 16/995 (2%) Strand=Plus/Plus Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250 ||| ||||| || || |||||||| |||||||| | ||| ||||| |||| ||||| ||| Sbjct 5474349 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTCCTTTCATGCATAACTTTCATACTAAG 5474408 Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTAC--CGCT-AGAGTCAAC 5307 ||| |||||||| | || ||| ||||||||| |||| || | || | |||| Sbjct 5474409 GTTAGCACGGTTGATGATATCAGCCCAAGTGTT---GATTACACGACACTGACTATCAAG 5474465 Query 5308 GACTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGA 5367 || || || ||||| || || | || || || |||||||||||| ||| || | || Sbjct 5474466 TACAGATTGGTTGAAATTGAAACAATTTAGGTTGAAAGCCATAGTGCTGATACCTAAAGC 5474525 Query 5368 GGTAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATT 5427 ||||| ||| || | | || ||||||| ||| | |||||| ||||| ||| || Sbjct 5474526 GGTAAACCAGATACCTAATACAGGCCAAGCAGCTAAGAAGAAGTGTAACGAACGAGAGTT 5474585 Query 5428 GTTAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTT 5487 ||| || |||||||| | ||||| | || ||||| | |||||||| | ||||| || Sbjct 5474586 GTTGAAACTAGCATATTAAAAGATCAATCGGCCAAAACAACCATGAGCGTCTACAATATT 5474645 Query 5488 ATACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGT 5547 ||| |||||| ||||||| |||||| | || || | || ||| | | | || Sbjct 5474646 ATAAGTTTCT-CCTCTTGACCGAATCTTTAACCTTTATTAGCAGATTCATTTTCTATGGT 5474704 Query 5548 TTCACGAATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACC 5607 ||| | || | |||||| || | |||| || ||| || | | || || Sbjct 5474705 TTCCCCGATAAAACTAGAAGTTACTAAGGAACCATACAAGGCACTAAATAGTGAGCCGCC 5474764 Query 5608 GAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTG 5667 |||||||||||| || || | |||||| || || ||||||||||| |||| ||| ||||| Sbjct 5474765 GAATACCCCAGCTACGCCTAACATGTGAAATGGGTGCATAAGGATGTTGTATTCGGCCTG 5474824 Query 5668 GAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACT 5727 |||||| | |||||| || ||||||| |||||| || ||||||||||||||| || | Sbjct 5474825 GAATACAATCATAAAATTGAAAGTACAAGAGATTCCTAGAGGCATACCATCAGAAAAGTT 5474884 Query 5728 TCCCTGTCCGAAAGGGT--ATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAA 5785 ||| || |||| |||| ||| ||||| || ||| ||||| ||||| || ||| || Sbjct 5474885 TCCTTGACCGATTGGGTAGATAAGGAAAATTGTG-GTA-GCTGCTGCAACGGGAGCTTAA 5474942 Query 5786 TATGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCATTGGCGTCCC 5845 ||||| || |||||| |||| ||| |||| | | | ||| | ||||| | || ||| Sbjct 5474943 TATGCAACAACAATCCAAGGTCTCATACCTAGACGGAAGCTATGCTCCCAATCACGACCC 5475002 Query 5846 AAGTAAGC-TGCGATACCAATAAGGAAGTGGAAGACGACGAGTTGGTATGGTCCTCCATT 5904 | |||| | || | |||| || |||||| | || | |||| || || || ||||| Sbjct 5475003 ATGTAAACAGGCTACGCCAAGAAAGAAGTGTAGAACAATTAGTTCTTAAGGACCACCATT 5475062 Query 5905 GTAAAGCCATTCATCGA--GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATT 5962 ||| | ||||||||| | ||| || |||||||| || | || || ||||| || || Sbjct 5475063 GTATAACCATTCATCAATGGAT--GCCGCTTCCCAAATAAGGTAAAAATGTAAACCTATA 5475120 Query 5963 GCGTTGGAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCT 6022 || || | | | || ||| || || || |||||| || |||| |||||| | || Sbjct 5475121 GCTGCAGAAGTAGTAATAATGGCACCGGAAATAATGTTGCTTTCATAAAGTAGAAACTCT 5475180 Query 6023 GCGACGGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATA 6082 | | |||||||| || || || ||||| ||||| || ||| | | ||| || | ||| Sbjct 5475181 GAAAAAGGTTCACGAATACCATCAATGTCTACTGGAGGAGCATCAATGAAGGCAATAATA 5475240 Query 6083 AATGCAGTAGTTGCGGTTAAGAGTGCGGGTATCATTAAGACACCAAACCACCCCACATAG 6142 ||| ||| |||||| || || | | | ||||| || || |||||||| | | || Sbjct 5475241 AATACAGAAGTTGCCGTCAATAAGGTATGGATCATGAAAACCCCAAACCATCTAATGTAA 5475300 Query 6143 AGGCGGTTGTTGGTGCTAGTAACCCAGTCACAGAA 6177 || ||| | |||||||| | ||||| | |||| Sbjct 5475301 AGATAGTTTTCAGTGCTAGTTATCCAGTTATAGAA 5475335 >seq10 Length=82529941 Score = 255 bits (282), Expect = 2e-63 Identities = 438/629 (70%), Gaps = 10/629 (2%) Strand=Plus/Minus Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250 ||| ||||| || || |||||||| |||||||| ||||| ||||| |||||||||||||| Sbjct 14034624 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACTTCCATACCAAG 14034565 Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGA-GTCAACGA 5309 ||| |||||||| | || ||| |||||||| || | | | | ||| | |||||| | Sbjct 14034564 GTTAGCACGGTTGATGATATCATCCCAAGTGTTAATTACACGATC-CTAAATGTCAACTA 14034506 Query 5310 CTGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGG 5369 | | || ||||| || || || || || || |||||||||||| ||| || | || || Sbjct 14034505 CATATTGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGTTGATACCAAAAGCGG 14034446 Query 5370 TAAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGT 5429 ||| ||| | | | || ||||| | | | | ||||| |||||| | | |||| Sbjct 14034445 TAAACCAGACACCTATTACAGGCCATGAAACTGGAAAGAAGTGTAAAGAATGAGAGTTGT 14034386 Query 5430 TAAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTAT 5489 | || || |||| | |||||| | || | || || | |||||| || || | || | Sbjct 14034385 TGAAACTCACATATTTGAAGATCAATCGGCAAACATAACGATGAGCGGCTACGGT-TTTT 14034327 Query 5490 ACGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTT 5549 | ||||| ||||| || |||||| || || | || ||| | || |||| Sbjct 14034326 AAGTTTCATCCTCCTGACCGAATCCGTAACCTTCATTAGCAGATTCATTTTTTGTGGTTT 14034267 Query 5550 CACGAATGAGCGA---AGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCAC 5606 | |||| | | |||||| || | |||| ||||| | || || | || | Sbjct 14034266 C---CATGATCAAACTAGAAGTTACCAAGGAACCATCCATAGAACTTAATAAGGAGCCGC 14034210 Query 5607 CGAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCT 5666 |||||||||| | |||| | |||||| | || |||| |||||| |||||||| ||| Sbjct 14034209 GGAATACCCCAACTGCACCTAACATGTGAAGTGGGTGCACAAGGATGTTGTGTTCAGCCC 14034150 Query 5667 GGAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAAC 5726 ||||||| | ||| || | ||||||||| |||| || ||||||||||||||| |||| Sbjct 14034149 GGAATACAATCATGAAACTGAAAGTACCAAAGATTCCTAGAGGCATACCATCAGATAAAC 14034090 Query 5727 TTCCCTGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAAT 5786 ||||||| || | ||||| | ||| || |||| | | | ||| || | ||||| Sbjct 14034089 TTCCCTGACCAATTGGGTAGATTAAGAAAACTGTGGTAGAAACTTCAAAAGGAGTTGAAT 14034030 Query 5787 ATGCTAC-GCAAATCCATGGTCGCATTCC 5814 |||| || || ||||| |||| ||| || Sbjct 14034029 ATGCAACATCATATCCAAGGTCCCATGCC 14034001 Score = 251 bits (278), Expect = 2e-62 Identities = 429/618 (69%), Gaps = 8/618 (1%) Strand=Plus/Minus Query 5201 TCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTGGCACGG 5260 || || || ||||| |||||||| ||||| ||||| || |||||||||||||| |||||| Sbjct 19029236 TCTAGGGGAAAGTTATGAGCATTACGTTCATGCATAACATCCATACCAAGGTTAGCACGG 19029177 Query 5261 TTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGA-GTCAACGACTGACTGATT 5319 || | || ||| |||||||| || | | | | ||| | |||||| || | || || Sbjct 19029176 TTGATGATATCATCCCAAGTGTTAATTACACGATC-CTAAATGTCAACTACATATTGGTT 19029118 Query 5320 GAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGTAAGCCATAT 5379 ||| || || || || || || |||||||||||| ||| || | || ||||| ||| | Sbjct 19029117 GAAATTGAAACCATTTAGGTTGAAAGCCATAGTGTTGATACCAAAAGCGGTAAACCAGAC 19029058 Query 5380 GCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAAGCTAGC 5439 | | || ||||||| | | ||||||| |||||| | | ||||| || | | Sbjct 19029057 ACCTATTACAGGCCAAGCATCTGGGAAGAAGTGTAAAGAATGAGAGTTGTTGAAACCCAC 19028998 Query 5440 ATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGTTTCTTC 5499 ||| |||||||| | || | || || |||||||| || || || ||||| ||||| || Sbjct 19028997 ATATTGGAAGATCAATCGGCAAATATAACCATGAGCGGCTACGATTTTATAAGTTTCATC 19028938 Query 5500 CTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACGAATGAG 5559 ||| || ||||| || || | || ||| | || ||||| |||| Sbjct 19028937 CTCCTGAACGAATCCTTAACCTTCATTAGCAGATTCATTTTTTGTGGTTTC---CATGAT 19028881 Query 5560 CGAA---GAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATACCCC 5616 | || ||||| || | |||| ||||| | || | | || | ||||||||| Sbjct 19028880 CAAACTCGAAGTTACCAAGGAACCATCCATAGAACTTAATAGGGAGCCGCGGAATACCCC 19028821 Query 5617 AGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATACGAA 5676 | | | || | |||||| | || |||| |||||| |||||||| ||| ||||||| | Sbjct 19028820 AACTGCGCCTAACATGTGAAGTGGGTGCACAAGGATGTTGTGTTCAGCCCGGAATACAAT 19028761 Query 5677 CATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACTTCCCTGTCC 5736 ||| || | ||||||||| |||| || ||||||||||||||| |||||||||| || Sbjct 19028760 CATGAAACTGAAAGTACCAAAGATTCCTAGAGGCATACCATCAGATAAACTTCCCTAACC 19028701 Query 5737 GAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAATATGCTACGCA 5796 || ||||| | ||| || |||| | | | ||| || | ||||||||| || Sbjct 19028700 GATTGGGTAGATTAAGAAAACTGTGGTAGAAACTTCAAAAGGAGTTGAATATGCAACATC 19028641 Query 5797 AATCCATGGTCGCATTCC 5814 |||||| |||| ||| || Sbjct 19028640 AATCCAAGGTCCCATGCC 19028623 Score = 242 bits (268), Expect = 1e-59 Identities = 445/648 (69%), Gaps = 8/648 (1%) Strand=Plus/Minus Query 5191 AGCTGCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAG 5250 ||| ||||| || || |||||||| |||||||| ||||| ||||| || ||||||||||| Sbjct 19121823 AGCAGCTAGGTCTAGAGGGAAGTTATGAGCATTACGTTCATGCATAACATCCATACCAAG 19121764 Query 5251 GTTGGCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGAC 5310 ||| |||||||| | || ||| |||||||| || | | | | | |||||| || Sbjct 19121763 GTTAGCACGGTTGATGATATCATCCCAAGTGTTAATTACACGATCTTAAATGTCAACTAC 19121704 Query 5311 TGACTGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGGT 5370 | || ||||| || || | || || || |||||||||||| ||| || | || ||| Sbjct 19121703 ATATTGGTTGAAATTGAA-ACATTTAGGTTGAAAGCCATAGTGTTGATACCAAAAGCGGT 19121645 Query 5371 AAGCCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTT 5430 || ||| | | | || ||||||| | | |||||||| |||||| | | ||||| Sbjct 19121644 AAACCAGACACCTATTACAGGCCAAGCAACTAGGAAGAAGTGTAAAGAATGAGACTTGTT 19121585 Query 5431 AAAGCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATA 5490 || || |||| |||||||| | || | || | |||||||| || || | ||||| Sbjct 19121584 GAAACTCACATATTGGAAGATCAATCGGCAAATATGACCATGAGCGGCTACGGTTTTATA 19121525 Query 5491 CGTTTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTC 5550 ||||| ||||| || || ||| || || | || ||| | || ||||| Sbjct 19121524 AGTTTCATCCTCCTGACCAAATCCGTAACCTTCATTAGCAGATTCATTTTTTGTGGTTTC 19121465 Query 5551 ACGAATGAGCGA---AGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACC 5607 |||| | | |||||| || | |||| ||||| | || | | || | Sbjct 19121464 ---CATGATCAAACTAGAAGTTACCAAGGAACCATCCATAGAACTTAATAGGGAGCCGCG 19121408 Query 5608 GAATACCCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTG 5667 ||||||| || | | || | |||||| | || |||| |||||| |||||||| ||| | Sbjct 19121407 GAATACCACAACTGCGCCTAACATGTGAAGTGGGTGCACAAGGATGTTGTGTTCAGCCCG 19121348 Query 5668 GAATACGAACATAAAGTTAAAAGTACCAGAGATACCAAGAGGCATACCATCACTGAAACT 5727 | ||| | ||| || ||||||||||| |||| || |||| |||||||||| ||||| Sbjct 19121347 GTATAAAATCATGAAACTAAAAGTACCAAAGATTCCTAGAGTCATACCATCAGATAAACT 19121288 Query 5728 TCCCTGTCCGAAAGGGTATACTAAAAATACTGAGTAGGCTGCGGCAACCGGTGCTGAATA 5787 |||||| |||| ||||| | ||| || |||| | | | ||| || | |||||| Sbjct 19121287 TCCCTGACCGATTGGGTAGATTAAGAAAACTGTGGTAGAAACTTCAAAAGGAGTTGAATA 19121228 Query 5788 TGCTACGCAAATCCATGGTCGCATTCCTAATCTGTAACTAAGTTCCCA 5835 ||| || |||| | ||||||| || | | | | ||||| ||||| Sbjct 19121227 TGCAACATCAATCTAAAGTCGCATGCC-AGACGGAAGCTAAGCTCCCA 19121181 Score = 223 bits (246), Expect = 1e-53 Identities = 346/488 (71%), Gaps = 5/488 (1%) Strand=Plus/Minus Query 5195 GCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTG 5254 ||||| || || |||||||| ||||||||| |||| ||||| ||| ||||||||||||| Sbjct 14308326 GCTAGGTCTAGAGGGAAGTTATGAGCATTTTGTTCATGCATAACTACCATACCAAGGTTA 14308267 Query 5255 GCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGAC 5314 |||| || | || ||| ||||||||| || | | ||| | |||||| | || Sbjct 14308266 GCACAATTGATGATATCAGCCCAAGTGTTAATTACACGACCCTGACTGTCAACTATAGAT 14308207 Query 5315 TGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCC-CATAGAGGTAAG 5373 || ||||| || || || || || || |||||||||||| ||| || | || | || Sbjct 14308206 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCAAAAAGGGCAAAT 14308147 Query 5374 CCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAA 5433 ||| || | || || |||||| | | ||||||| ||||| | | ||||| || Sbjct 14308146 CCAGATACCTACTACAGGCCAAACATCTGGGAAGAAGTGTAACGAATGAGATTTGTTGAA 14308087 Query 5434 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGT 5493 |||||||| | |||||| | | | ||| || ||||||| || || || ||||| || Sbjct 14308086 ACTAGCATATTAGAAGATCAATAAGCAAAAATAACCATGAGAGGCTACGATATTATAAGT 14308027 Query 5494 TTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACG 5553 |||||||||||| |||||||| || || | || |||| | | | ||||| | Sbjct 14308026 TTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGGAGATTCATTTTCTATGGTTTCCCT 14307967 Query 5554 AATGAGCGAAGAAG-TAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATA 5612 ||| | | ||||| || |||| | ||| ||||||| ||| | | || ||| ||| Sbjct 14307966 AATCAAAGTAGAAGTTACCAAGGAAT-CATACATAGCACTGAATAGGGAGCCGCCG-ATA 14307909 Query 5613 CCCCAGCAACACCGAGCATGTGGA-ACGGATGCATAAGGATATTGTGTTCTGCCTGGAAT 5671 ||||||| || || | |||||| | | | || |||||||| |||||||| |||||||| Sbjct 14307908 CCCCAGCTACGCCTAACATGTGAATATGTGTGAATAAGGATGTTGTGTTCAACCTGGAAT 14307849 Query 5672 ACGAACAT 5679 || | ||| Sbjct 14307848 ACAATCAT 14307841 Score = 208 bits (230), Expect = 2e-49 Identities = 343/488 (70%), Gaps = 9/488 (2%) Strand=Plus/Minus Query 5195 GCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTG 5254 ||||| || || ||||| |||||||| |||| ||||| ||| ||||||||||||| Sbjct 19169370 GCTAGGTCTAGAGGGAA----TGAGCATTATGTTCATGCATAACTCCCATACCAAGGTTA 19169315 Query 5255 GCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGAC 5314 |||| || | || ||| |||||||||| || | | ||| | |||||| | || Sbjct 19169314 GCACAATTGATGATATCAGCCCAAGTGGTAATTACACGACCCTGACTGTCAACTATAGAT 19169255 Query 5315 TGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGG-TAAG 5373 || ||||| || || || || || || |||||||||||| ||| || | | || || Sbjct 19169254 TGGTTGAAATTGAAACCATTTAGGTTGAAAGCCATAGTGCTGATACCAAAAACGGCAAAT 19169195 Query 5374 CCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAA 5433 ||| |||| || || |||||| | | ||||| || ||||| ||| ||||| || Sbjct 19169194 CCAGATGCCTACTACAGGCCAAACATCTAGGAACAAGTGTAACGAACGAGAGTTGTTGAA 19169135 Query 5434 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGT 5493 |||||||| | |||||| | | | ||| || |||||||| || || || ||||| || Sbjct 19169134 ACTAGCATATTAGAAGATCAATAAGCAAAAATAACCATGAGCGGCTACGATATTATAAGT 19169075 Query 5494 TTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACG 5553 |||||||||||| || ||||| || || | || |||| | | | ||||| | Sbjct 19169074 TTCTTCCTCTTGACCAAATTTGTAACCTTCATTAGGAGATTCATTTTCTATGGTTTCCCT 19169015 Query 5554 AATGAGCGAAGAAG-TAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATA 5612 ||| | | ||||| || |||| | ||| ||||||| || | | || ||| ||| Sbjct 19169014 AATCAAAGTAGAAGTTACCAAGGAAT-CATACATAGCACTAAATAGGGAGCCGCCG-ATA 19168957 Query 5613 CCCCAGCAACACCGAGCATGTGGA-ACGGATGCATAAGGATATTGTGTTCTGCCTGGAAT 5671 ||||||| || || | |||||| | | | || |||||||| || ||||| |||||||| Sbjct 19168956 CCCCAGCTACGCCTAACATGTGAATATGTGTGAATAAGGATGTTTTGTTCAACCTGGAAT 19168897 Query 5672 ACGAACAT 5679 || | ||| Sbjct 19168896 ACAATCAT 19168889 Score = 197 bits (218), Expect = 4e-46 Identities = 337/486 (69%), Gaps = 2/486 (0%) Strand=Plus/Minus Query 5195 GCTAGATCAAGTGGGAAGTTGTGAGCATTTCGTTCGTGCATTACTTCCATACCAAGGTTG 5254 ||||| || || |||||||| |||||||| |||| ||||| ||| |||||| |||||| Sbjct 19113530 GCTAGGTCTAGAGGGAAGTTATGAGCATTATGTTCATGCATAACTACCATACAAAGGTTA 19113471 Query 5255 GCACGGTTCAGGACATCTGCCCAAGTGGGAACGATTCTACCGCTAGAGTCAACGACTGAC 5314 |||| || | || ||| ||||||||| || | | ||| || |||||| | || Sbjct 19113470 GCACAATTGATGATATCAGCCCAAGTGTTAATTACACGACCCTTACTGTCAACTATAGAT 19113411 Query 5315 TGATTGAAGTTAAAGCCGTTAAGATTAAAAGCCATAGTGGAGATTCCCATAGAGG-TAAG 5373 || ||||| || || || | | || |||||||||||| || || | | || || Sbjct 19113410 TGGTTGAAATTGAAACCATATATTTTTAAAGCCATAGTGCTAATACCAAAAACGGCAAAT 19113351 Query 5374 CCATATGCAAACGACGGGCCAAGTAGCCAGGAAGAAATGTAAACTACGGCTATTGTTAAA 5433 | | || | || || |||||| | | |||||||| ||||| ||| ||||| || Sbjct 19113350 CTAGATACCTACTACAGGCCAAACATCTAGGAAGAAGTGTAACGAACGAGAGTTGTTGAA 19113291 Query 5434 GCTAGCATACTGGAAGATGAGTCTCCCAAAGTAGCCATGAGCCGCAACAATGTTATACGT 5493 |||||||| | |||||| | | | ||| || |||||||| || || || ||||| || Sbjct 19113290 ACTAGCATATTAGAAGATCAATAAGCAAAAATAACCATGAGCGGCTACGATATTATAAGT 19113231 Query 5494 TTCTTCCTCTTGGCCGAATTTATATCCATAGTTCTGAGAAGTAAGCCCAGTTGTTTCACG 5553 |||||||||||| |||||||| || || | || |||| | | | ||||| | Sbjct 19113230 TTCTTCCTCTTGACCGAATTTGTAACCTTCATTAGGAGATTCATTTTCTATGGTTTCCCT 19113171 Query 5554 AATGAGCGAAGAAGTAACAAGACTTCCATGCATAGCAGCGAACAAAGCTCCACCGAATAC 5613 ||| | | |||||| || | |||| ||||||| || | | || || |||| Sbjct 19113170 AATCAAAGTAGAAGTTACCAAGGAACCATACATAGCACTAAATAGGGAGCCGTCG-ATAC 19113112 Query 5614 CCCAGCAACACCGAGCATGTGGAACGGATGCATAAGGATATTGTGTTCTGCCTGGAATAC 5673 |||||| | || | ||||| | | || |||||||| |||||||| |||||||||| Sbjct 19113111 CCCAGCTATGCCTAACATGTAATATGTGTGAATAAGGATGTTGTGTTCAACCTGGAATAC 19113052 Query 5674 GAACAT 5679 | ||| Sbjct 19113051 AATCAT 19113046 >seq7 Length=79292169 Score = 82.4 bits (90), Expect = 2e-11 Identities = 126/176 (72%), Gaps = 3/176 (2%) Strand=Plus/Minus Query 5911 CCATTCATCGA-GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTGG 5969 ||||||||| | | || | ||||||||||| || || || ||||| | || || | Sbjct 78111585 CCATTCATCAACGGATGTC-GCTTCCCAGATTGGGTAAAAATGTAAACTTATAGCTGCAG 78111527 Query 5970 AGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGACGG 6029 | | || | || ||| || || || ||||| ||| | || | |||||| |||| || | Sbjct 78111526 AAGTAGGAATAATGGCACCGGAAATAATGTTATTTTCGTAAAATAGAGACCCTGAAACAG 78111467 Query 6030 GTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAAT 6085 |||||| || || || ||||| ||||| || ||||| | ||| || |||||| || Sbjct 78111466 GTTCACAAATTCCATCAATGTCTACTGGAGGAGCAGCAATGAAGGC-AATATATAT 78111412 >seq5 Length=77991103 Score = 80.6 bits (88), Expect = 8e-11 Identities = 128/178 (72%), Gaps = 7/178 (4%) Strand=Plus/Minus Query 5911 CCATTCATCGA-GATTGGCTGCTTCCCAGATGGGATAGAAGTGTAACCCAATTGCGTTG- 5968 ||||||||| | | || | ||||||||||| || || || ||||| | || |||| Sbjct 7270204 CCATTCATCAACGGATGTC-GCTTCCCAGATTGGGTAAAAATGTAAACTTAT--AGTTGC 7270148 Query 5969 -GAGCTGGGTACAACGGCTCCTGATATGATGTTGTTTCCATAGAGTAGAGATCCTGCGAC 6027 || | || | || ||| || || || ||||| ||| | || | |||||| |||| || Sbjct 7270147 AGAAGTAGGAATAATGGCACCGGAAATAATGTTATTTTCGTAAAATAGAGACCCTGAAAC 7270088 Query 6028 GGGTTCACGTATGCCGTCGATGTCGACTGGGGGTGCAGCTACGAATGCTAATATAAAT 6085 |||||||| || | || ||||| ||||| || ||||| | ||| || |||||| || Sbjct 7270087 AGGTTCACGAATTACATCAATGTCTACTGGAGGAGCAGCAATGAAGGC-AATATATAT 7270031 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 152649578247432