Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pennellii_20[refseq_20GCF_5F001406875.1_202014-07-11] 12 sequences; 926,426,464 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq2 100 5e-15 >seq2 Length=59803892 Score = 100 bits (110), Expect = 5e-15 Identities = 171/248 (69%), Gaps = 0/248 (0%) Strand=Plus/Minus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||||| || ||||| || |||||||| | || || |||||||| ||||||||| Sbjct 59230433 GCCTCGGCAACCTGGACATCTTTCATGAACCTTCCAGCGAGGTTCTCTAAAACGATGCCG 59230374 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 || |||||| |||||||| || || || |||| || || | || || | || Sbjct 59230373 TCTGAGGCGGCAAAAAAGGCAAGAACATGAGTGATGAAATGCCTTTCACCGGATGTTAGG 59230314 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 ||||||| || |||| | ||| ||||| || || | ||||| || || ||| Sbjct 59230313 TTTTCCCAGTGACGAGTATCGGTGGAGAGATCGACTTCTTCTACCGTCCAGAAAGATGCC 59230254 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 ||| || |||||||| ||||| ||| || | || | || ||||||| | || ||| Sbjct 59230253 ATGGCTTTCTTGTACATTTCCCAAATCTGTGGATACTGAATTGGGAACATACAGAATCGA 59230194 Query 796390 TTGGGGTT 796397 | ||||| Sbjct 59230193 TCTGGGTT 59230186 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916245123505268