Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pennellii_20[refseq_20GCF_5F001406875.1_202014-07-11] 12 sequences; 926,426,464 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq10 86.0 5e-12 >seq10 Length=82529941 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 || ||||||||| | || |||||| || || || |||| ||| || |||||||| ||| Sbjct 500444 GATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGAAAACAATTGGAA 500385 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| || ||| ||| ||||||||||| || |||||||| || || || | || || Sbjct 500384 GATGGTAGAACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCACCTTGTTCTG 500325 Query 106473 AGGTTACGAGGAGGA 106487 ||| | | |||||| Sbjct 500324 AGGCTCAGGGGAGGA 500310 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402329541159296