Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pennellii_20[refseq_20GCF_5F001406875.1_202014-07-11] 12 sequences; 926,426,464 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq2 123 4e-22 >seq2 Length=59803892 Score = 123 bits (136), Expect = 4e-22 Identities = 228/329 (69%), Gaps = 4/329 (1%) Strand=Plus/Plus Query 1455753 TGTTCCCCATCCGCTACCAGCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTT 1455812 ||||||| || | || | | ||| ||||||||||| ||| || ||| ||| || || Sbjct 59230205 TGTTCCCAATTCAGTATCCACAGATTTGGGAAATGTA-CAAGAAAGCCATGGCATCTTTC 59230263 Query 1455813 TGGACCGCCGAGGAGGTCGACCTCGGCGCCGACACGGTCCACTGGGTGTCGCTGAGCGAC 1455872 ||||| | || || ||||| ||| | |||| || ||||||| || | | Sbjct 59230264 TGGACGGTAGAAGAAGTCGATCTCTCCACCGATACTCGTCACTGGGAAAACCTAACATCC 59230323 Query 1455873 GACGAGCGCCATTTCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGT 1455932 | || | |||||||||| || || || ||||||||| |||||| || |||||||| Sbjct 59230324 GGTGAAAGGCATTTCATCACTCATGTTCTTGCCTTTTTT-GCCGCCTCAGACGGCATCGT 59230382 Query 1455933 GGCCGAGAACCTGGCCGGCCGCTTTATGAAAGAGGTCCA-ATTGCCAGAGGCACGTTTGT 1455991 |||||||| || || | || |||||||| ||||| ||||| ||||| ||| | Sbjct 59230383 TTTAGAGAACCTCGCTGGAAGGTTCATGAAAGATGTCCAGGTTGCC-GAGGCTCGTGCTT 59230441 Query 1455992 TTTACGGGTTCCAGATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCG 1456051 | || |||||||| |||||||| || || ||||| || || | ||| | ||| | | Sbjct 59230442 TCTATGGGTTCCAAATCGCCATTGAGAATATCCATTCCGAGATGTACAGTTTGCTGTTGG 59230501 Query 1456052 ACACCTACGTCAAGGACCCGGTCGAGAAG 1456080 | | ||| ||||||| | | ||| ||| Sbjct 59230502 AGTCGTACATCAAGGATTCTGACGAAAAG 59230530 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177810042577944