Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pennellii_20[refseq_20GCF_5F001406875.1_202014-07-11] 12 sequences; 926,426,464 total letters Query= NC_028104.1 Length=73689 Score E Sequences producing significant alignments: (Bits) Value seq1 105 3e-18 >seq1 Length=109333515 Score = 105 bits (116), Expect = 3e-18 Identities = 159/224 (71%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 65086 TCGTGTTCCAAACTGACCATTTGGCATTAATAAATTAATATTGTTTGAACCAATAAAATT 65145 ||| || ||||||||||||||||| |||| ||| | ||| || |||| | | | Sbjct 92297966 TCGAGTGCCAAACTGACCATTTGGTTGCAATAGATTTACATTATTGCTGCCAACATAGTC 92298025 Query 65146 CTGAGCCATTCCGATAAT--TGCTGCATTTAAACTCGCTTCACCGTGATGATATCCTGAA 65203 || ||||| || || || |||||| | | |||| ||||| |||||||| |||| Sbjct 92298026 TTGTGCCATGCCAATGATGGTGCTGC--TAAGACTCTGCTCACCATGATGATAAGCTGAG 92298083 Query 65204 TGTTCAGAGACATATCCACTAAATTGAGCAACTTTTATTTCCGTTGTTAAATTCTTTTTA 65263 || ||||||||||| ||| |||||| | ||||||| |||| | |||||| | ||| Sbjct 92298084 TGCTCAGAGACATAACCAGAAAATTGGGAAACTTTTGCTTCCTTAACAAAATTCCTCTTA 92298143 Query 65264 AATGCAGAATACAATATTTTCCGTAAACTAATTTTCAATCCATC 65307 |||||| | ||| || |||| | || |||||| ||||| Sbjct 92298144 AATGCACAGAACAGAATCTTCCTTTGACCCGGTTTCAAACCATC 92298187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 235679965531800