Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pimpinellifolium_20[genbank_20GCA_5F000230315.1_202011-10- 06] 309,180 sequences; 688,247,059 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq300666 87.8 1e-12 >seq300666 Length=9326 Score = 87.8 bits (96), Expect = 1e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 101752 AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCC 101811 || ||||||||| |||||||| || | | | ||| |||||||| ||||||||||| Sbjct 4897 AGAGACATGAGCTATCATGCATGTCAGCAAGGCATAAGATGCAATGTTGAATGGCACTCC 4838 Query 101812 TAACCCCATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATA 101871 || |||||||| || |||| ||||||| |||||||| |||| |||| ||||| Sbjct 4837 CAAACCCATATCGGCAGATCGCTGATACATCTGACAGGATAGCTCCCCATTGGCTACATA 4778 Query 101872 AAA 101874 ||| Sbjct 4777 AAA 4775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359889958064180