Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20pimpinellifolium_20[genbank_20GCA_5F000230315.1_202011-10-
06] 309,180 sequences; 688,247,059 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq261322 187 5e-42
seq250116 165 1e-35
seq260619 158 2e-33
seq30399 158 2e-33
seq68649 154 3e-32
seq45869 147 4e-30
seq218976 141 2e-28
seq260618 134 3e-26
seq277689 127 4e-24
seq164539 127 4e-24
seq269538 123 5e-23
seq183807 123 5e-23
seq227670 122 2e-22
seq284532 100 5e-16
seq262399 100 5e-16
seq174548 100 5e-16
seq148907 100 5e-16
seq243797 95.1 2e-14
seq44843 86.0 1e-11
seq36495 86.0 1e-11
seq6742 84.2 4e-11
>seq261322
Length=6793
Score = 187 bits (206), Expect = 5e-42
Identities = 178/228 (78%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || |||||||| || |||||||| || || |
Sbjct 4351 CCACCACGGAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCT 4410
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| |||||||| || | || || ||||| ||||||
Sbjct 4411 AGCGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAATCGCTGCTGGTCTGGTGGA 4470
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||||||||||||||| ||||| || || |||||||||| ||| |||||
Sbjct 4471 ATGCCTTCCTTGTCTTGAATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACC 4530
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|||||||| ||||| || ||||| |||||||| || || |||||||||
Sbjct 4531 TCCAAGGTAATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATT 4578
>seq250116
Length=2524
Score = 165 bits (182), Expect = 1e-35
Identities = 162/208 (78%), Gaps = 1/208 (0%)
Strand=Plus/Plus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || || ||||||||||||||||| ||||| | ||||| | |||||||| |
Sbjct 196 CAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCAA 255
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||| ||||| || || || ||||| || || || || ||||||||||||||||||||||
Sbjct 256 GCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGAA 315
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| || ||||| || |||||||| | || || || | |||||||| ||||
Sbjct 316 TCTTAGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCAAGAGTGATGGTCTTTC 375
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| ||||| ||||| || |||||||||||
Sbjct 376 CGGTGAGTGTCTTAACAAATATCTGCAT 403
Score = 104 bits (114), Expect = 4e-17
Identities = 128/175 (73%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346
|||| | ||||| | |||||||| | ||| ||||| || || || || || || ||||
Sbjct 1 AATCAGCAAGTGTTCGGCCATCTTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGT 60
Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406
| || ||||| ||||||||||||||||| || || ||||| |||||||||||||
Sbjct 61 CTGGGGGAATACCTTCCTTGTCTTGAATTTTAGCTTTGACATTATCGATGGTGTCTGAGC 120
Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || | || || || ||||| || || || || || || || |||||
Sbjct 121 TCTCGACCTCAAGAGTTATAGTCTTTCCGGTCAGAGTTTTAACAAAGATTTGCAT 175
>seq260619
Length=5677
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || ||||| || | |||||||| || || |||||||| || ||||| ||||| |
Sbjct 421 CCACCACGAAGACGGAGCACCAAGTGGAGAGTTGACTCTTTCTGAATGTTGTAATCAGCT 480
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | |||||| || || || || || || || ||||| || |||
Sbjct 481 AGAGTACGACCGTCTTCAAGCTGCTTTCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 540
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| || ||||| || || || || |||||||||| ||| ||
Sbjct 541 ATGCCTTCCTTGTCCTGGATCTTGGCTTTAACATTGTCAATGGTGTCTGAGCTTTCCACC 600
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || ||||| |||||||| || || |||||||||||
Sbjct 601 TCAAGGGTGATAGTCTTTCCAGTGAGGGTTTTAACAAATATCTGCAT 647
Score = 152 bits (168), Expect = 9e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || ||||| || | |||||||| || || || || || |||||||| ||||| |
Sbjct 191 TTCCACCACGAAGACGGAGCACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCAG 250
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
|| ||||| || || || | |||||| || || || || | ||||| ||||| || |
Sbjct 251 CAAGGGTCCTGCCGTCCTCAAGCTGCTTGCCCGCAAAGATCAACCTTTGCTGGTCTGGGG 310
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
||||||||||||||||||| ||||| ||||| || || |||||||| | ||| |
Sbjct 311 GAATGCCTTCCTTGTCTTGGATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAA 370
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || | ||||||||| ||||| || | || || ||||| || |||||
Sbjct 371 CCTCAAGGGTGATGGTCTTTCCTGTCAAAGTTTTCACGAAAATTTGCAT 419
Score = 131 bits (144), Expect = 3e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 68271 TCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAAT 68330
|| || |||||||| ||||| | || ||||| || || || | |||||| || || ||
Sbjct 1 TCCTTCTGGATGTTGTAATCAGCAAGGGTCCTGCCGTCCTCAAGCTGCTTGCCCGCAAAG 60
Query 68331 ATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCC 68390
|| | ||||| ||||| || |||||||||||||||||||| ||||| ||||| ||
Sbjct 61 ATCAACCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTAACATTG 120
Query 68391 TCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACG 68450
|| |||||||| | ||| || || | ||||||||| ||||| || | ||||| ||
Sbjct 121 TCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTTTCCAGTCAAAGTCTTCACA 180
Query 68451 AATATCTGCATT 68462
|| || ||||||
Sbjct 181 AAAATTTGCATT 192
>seq30399
Length=1829
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | ||||| || || |||||||| || |||||||| || || |
Sbjct 1199 CCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCT 1140
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | |||||||| |||||||| || || || || | || || ||||| || |||
Sbjct 1139 AGGGTGCGGCCATCTTCCAACTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGA 1080
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||| || || ||||| ||||||||| || |||||||||| ||| ||
Sbjct 1079 ATGCCTTCCTTATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTTTCGACC 1020
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | ||| || || || |||||||| ||||| ||||| ||||||||
Sbjct 1019 TCAAGGGTAATCGTCTTACCCGTGAGAGTCTTCACGAAGATCTGCAT 973
Score = 140 bits (154), Expect = 6e-28
Identities = 167/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || || ||||| || |||||||| || ||||
Sbjct 1655 CCACCACGTAGACGGAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCA 1596
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || || || | |||||| || ||||| || | || || ||||| || |||
Sbjct 1595 AGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGGGGA 1536
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| || ||||| ||||| || || |||||||| | ||| ||
Sbjct 1535 ATTCCCTCCTTGTCCTGGATCTTAGCCTTAACATTATCAATGGTGTCGGAGCTTTCCACC 1476
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| |||||||| ||||| ||||||||||| || || ||||||||
Sbjct 1475 TCCAAAGTGATGGTCTTTCCGGTGAGGGTCTTAACAAAAATCTGCAT 1429
Score = 109 bits (120), Expect = 1e-18
Identities = 119/158 (75%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 68304 CCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCC 68363
||||| || | |||||| || || || || | || || ||||| || ||||| || |||
Sbjct 1814 CCATCCTCGAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCC 1755
Query 68364 TTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTG 68423
|||||||| ||||| |||||||| || |||||||| | || || |||| ||||
Sbjct 1754 TTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAGGGTG 1695
Query 68424 ATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||||||| || || |||||||| || || || |||||
Sbjct 1694 ATGGTTTTCCCGGTAAGGGTCTTCACAAAGATTTGCAT 1657
>seq68649
Length=3576
Score = 154 bits (170), Expect = 3e-32
Identities = 171/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || ||||| || || |||||||| || || |
Sbjct 2522 CCACCACGGAGACGAAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCT 2463
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || | || || ||||| ||||||
Sbjct 2462 AGCGTTCGGCCATCCTCAAGCTGCTTTCCCGCGAAAATCAACCTCTGCTGGTCTGGTGGA 2403
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|||||||||||||| |||||||| ||||| || || ||||| || | ||| |||||
Sbjct 2402 ATGCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCAATGGTATCCGATGACTCTACC 2343
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
|| ||||| || || || ||||| |||||||| || || |||||||||
Sbjct 2342 TCTAAGGTAATAGTCTTGCCCGTTAGGGTCTTCACAAAGATCTGCATT 2295
>seq45869
Length=5042
Score = 147 bits (162), Expect = 4e-30
Identities = 151/195 (77%), Gaps = 2/195 (1%)
Strand=Plus/Plus
Query 68272 CTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATA 68331
|||| || ||||| ||||| | || || | |||||||| | |||||| |||||||| |
Sbjct 4375 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAGA 4434
Query 68332 TGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCT 68391
| | || || ||||| |||||||| |||||||||||||||||||| || ||||| |
Sbjct 4435 TCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTGT 4494
Query 68392 CGATGGTGTCTGCT-GATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACG 68450
| || ||||| ||| ||||| ||||| | ||||| || || ||||| || || || |||
Sbjct 4495 CAATAGTGTC-GCTCGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACG 4553
Query 68451 AATATCTGCATTATG 68465
|| ||||||||| ||
Sbjct 4554 AAGATCTGCATTTTG 4568
>seq218976
Length=24853
Score = 141 bits (156), Expect = 2e-28
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || |||||||| || |||||||| || |||| || || | ||||| || | ||||
Sbjct 11069 TGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTACGACCATCCTCAAGCTGC 11010
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| |||||||| || | | || ||||| || ||||| ||||||||||| || |||||
Sbjct 11009 TTTCCGGCGAAAATCAAACGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCCTGGATCTTG 10950
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
|| || || ||||||||||| | || || || || | |||||| || || |||||
Sbjct 10949 GCTTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTGATCGTCTTCCCCGTT 10890
Query 68439 AGGGTCTTGACGAATATCTGCAT 68461
||||| || ||||| ||||||||
Sbjct 10889 AGGGTTTTCACGAAGATCTGCAT 10867
>seq260618
Length=7988
Score = 134 bits (148), Expect = 3e-26
Identities = 148/197 (75%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324
|| ||||| ||||||||||| || || | || ||||| |||||||| | ||||||||
Sbjct 821 GTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCTTCAAGTTGCTTCCCT 762
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
|| || || ||||| || ||||| ||||| || || |||||||| ||||| || |||||
Sbjct 761 GCAAAGATCAGTCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGAATTTTAGCCTTC 702
Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
|| || ||||| || | || || ||||| || |||||||| || || | ||||
Sbjct 701 ACATTGTCAATGGTATCAGAACTCTCCACCTCCAAAGTTATGGTTTTCCCAGTCAAGGTC 642
Query 68445 TTGACGAATATCTGCAT 68461
|| || || ||||||||
Sbjct 641 TTCACAAAAATCTGCAT 625
Score = 131 bits (144), Expect = 3e-25
Identities = 129/167 (77%), Gaps = 0/167 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| |||||||| || | |||||||| || || ||||| || |||||||| ||||| |
Sbjct 167 CCACCGCGAAGACGAAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCA 108
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| ||||| || || || | |||||| || || || || | ||||| ||||| || |||
Sbjct 107 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCCGCAAAGATCAACCTTTGCTGGTCTGGGGGA 48
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTC 68401
||||||||||||||||| ||||| ||||| || || ||||||||
Sbjct 47 ATGCCTTCCTTGTCTTGGATCTTAGCCTTAACATTGTCAATGGTGTC 1
>seq277689
Length=6962
Score = 127 bits (140), Expect = 4e-24
Identities = 190/267 (71%), Gaps = 2/267 (1%)
Strand=Plus/Plus
Query 172937 CTCGTTCAGAGGTACCCCGAGTGCAAGGTGGTGGTGCTCGACAAGATGGACTACTGCGCG 172996
|| |||| ||| ||||| || | ||| | ||||| || |||||| | || || ||| |
Sbjct 972 CTTGTTCGGAGTTACCCTGATTACAATATTGTGGTTCTTGACAAGCTTGATTATTGCTCA 1031
Query 172997 ACCCTGAACAACCTGGCAACAGTTCGAGATGCTCCCAATTTCAAGTTCGTCAAGGGAGAT 173056
| |||||| || || | || |||| | | || ||||| ||||| || |||||||||
Sbjct 1032 AACCTGAAAAATCTTTCCCCATCTCGATCTTCCCCTAATTTTAAGTTTGTTAAGGGAGAT 1091
Query 173057 ATTCAATCTACTGATCTCCTGGCGCACGTCCTGAAGCAGGAAAAAATTGACACGATTATG 173116
||| | ||||||| | || | || | || || |||||||| || |||
Sbjct 1092 ATTGGCAGTGCTGATCTTGTTAACTACCTTCTCATCACCGAGAACATTGACACTATAATG 1151
Query 173117 CACTTTGCTGCGCAGACCCATGTGGACAACTCGTTCGGTAACTCGC-TGGCATTTACCAT 173175
||||||||||| ||||||||||| |||||||| || ||||| | || | | || ||||
Sbjct 1152 CACTTTGCTGCTCAGACCCATGTCGACAACTCCTTTGGTAA-TAGCTTTGAGTTCACCAA 1210
Query 173176 GAACAACGTCTACGGGACCCACGTTCT 173202
||||||| | || || || ||||| ||
Sbjct 1211 GAACAACATTTATGGCACACACGTGCT 1237
>seq164539
Length=4213
Score = 127 bits (140), Expect = 4e-24
Identities = 165/228 (72%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || || || || | || | ||| || |||||||| || ||||| || || || |
Sbjct 3941 CCACCACGGAGACGGAGGACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGCA 4000
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | ||||| || | |||||| || ||||| || | || || ||||| |||||
Sbjct 4001 AGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGTGGG 4060
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || |||||||| |||||||| || || || ||||||||||| | || ||
Sbjct 4061 ATCCCCTCCTTGTCCTGAATCTTAGCTTTCACATTGTCGATGGTGTCAGAACTCTCCACC 4120
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
||||| |||||||| || || || | |||||| || || |||||||||
Sbjct 4121 TCCAAAGTGATGGTCTTCCCGGTCAAGGTCTTCACAAAGATCTGCATT 4168
>seq269538
Length=12246
Score = 123 bits (136), Expect = 5e-23
Identities = 153/208 (74%), Gaps = 1/208 (0%)
Strand=Plus/Minus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| || || || |||||||| ||||||||||| || | || || | ||||| || |
Sbjct 648 CAAGATGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGCAAGGGTGCGGCCATCCTCAA 589
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
|||||| || || || ||||| || ||||| || ||||| || ||||||||||| || |
Sbjct 588 GCTGCTTACCAGCAAAGATGAGCCTCTGTTGATCTGGTGGGATCCCTTCCTTGTCCTGTA 529
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
||||||| || || || || || || | || || ||||| ||||| || || |
Sbjct 528 TCTTTGCTTTCACATTGTCAATAGTATCAGAGCTCTCCACCTCCAATGTGATTGTCTTCC 469
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || || ||||| || || ||||||||
Sbjct 468 CAGTAAGAGTCTTCACAAAGATCTGCAT 441
Score = 118 bits (130), Expect = 2e-21
Identities = 155/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 68247 CGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCA 68306
||||| |||| || || || ||||| || |||||||| || || | || ||||||||
Sbjct 427 CGCAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTCCTCCCG 368
Query 68307 TCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTG 68366
|| || | || || || || || || | | |||||||| || ||||| || ||||||
Sbjct 367 TCCTCAAGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTG 308
Query 68367 TCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATG 68426
|||||||||||||| || || || ||||| |||| || || ||||| || ||
Sbjct 307 TCTTGAATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACCTCCAATGTAATT 248
Query 68427 GTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || || || | |||||||| || || |||||
Sbjct 247 GTCTTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 213
Score = 102 bits (112), Expect = 1e-16
Identities = 149/211 (71%), Gaps = 0/211 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || | |||||| | || | ||| || || || ||||| || ||||| ||||| |
Sbjct 211 CCACCTCTAAGGCGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCC 152
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
| ||||| ||||| || | ||||| || || || || | ||| || ||||| || |||
Sbjct 151 AACGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGGA 92
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
|| || ||||||||||| |||||||| || || ||||| || |||| || ||
Sbjct 91 ATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCGATAGTATCTGAACTCTCAACC 32
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCT 68445
||||| || || || || || || | ||||
Sbjct 31 TCCAAAGTAATTGTCTTCCCTGTCAATGTCT 1
>seq183807
Length=6005
Score = 123 bits (136), Expect = 5e-23
Identities = 147/198 (74%), Gaps = 1/198 (1%)
Strand=Plus/Minus
Query 68265 GTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCG 68324
|| ||||| | ||||||||| ||||| | | ||| |||||||| | ||| |||||
Sbjct 5624 GTAGACTCGTCTTGGATGTTGTAATCAGCAACTGTTTGGCCATCTTCAAGCTGTTTCCCA 5565
Query 68325 GCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTG 68384
|| || || || || || || || || |||||||||||||||||||||||||| || ||
Sbjct 5564 GCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGAATCTTAGCTTTT 5505
Query 68385 ACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTC 68444
|| || || ||||| | || || || | |||||||| ||||| ||||| |||
Sbjct 5504 ACATTATCAATAGTGTCAGAGCTCTCGACCTCAAGAGTGATGGTCTTTCCGGTGAGCGTC 5445
Query 68445 TT-GACGAATATCTGCAT 68461
|| || |||||||||||
Sbjct 5444 TTAAACAAATATCTGCAT 5427
Score = 120 bits (132), Expect = 6e-22
Identities = 128/169 (76%), Gaps = 0/169 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
|| || |||||||| | || | ||| || |||||||| ||||||||||| ||||| |
Sbjct 5869 CCACCACGAAGGCGAAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGTA 5810
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
||||| | |||||||| | || ||||| || || || || || || ||||| || | |
Sbjct 5809 AGTGTTCGGCCATCTTCAAGCTATTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGAA 5750
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTG 68403
|| ||||||||||||| ||| || || ||||| || ||||||||||
Sbjct 5749 ATACCTTCCTTGTCTTCAATTTTAGCTTTGACATTATCAATGGTGTCTG 5701
>seq227670
Length=5094
Score = 122 bits (134), Expect = 2e-22
Identities = 153/208 (74%), Gaps = 3/208 (1%)
Strand=Plus/Minus
Query 68255 CAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
|||| |||| ||||||||||| || || || || || | || ||||| ||||| || |
Sbjct 265 CAAGATGTAAGGTGGACTCTTTCTGAATATTGTAGTCAGCCAGGGTCCTTCCATCCTCAA 206
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||||| | | || || ||||| || ||||| || ||||| |||||||| || ||||
Sbjct 205 GTTGCTTGC--GGAAAGATCAGTCTCTGCTGGTCTGGAGGAATCCCTTCCTTATCCTGAA 148
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
| || ||||| || || || || || | ||| ||||| | ||||||||| ||||
Sbjct 147 TTTTGGCCTTCACATTGTCAATAGTATCGGAACTTTCAACTTCAAGGGTGATGGTCTTTC 88
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || || |||||||| || ||||||||
Sbjct 87 CAGTAAGTGTCTTGACAAAGATCTGCAT 60
>seq284532
Length=1758
Score = 100 bits (110), Expect = 5e-16
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 463 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 522
Query 84516 CCCAC 84520
|||||
Sbjct 523 CCCAC 527
>seq262399
Length=1756
Score = 100 bits (110), Expect = 5e-16
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1639 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1580
Query 84516 CCCAC 84520
|||||
Sbjct 1579 CCCAC 1575
>seq174548
Length=1903
Score = 100 bits (110), Expect = 5e-16
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 1262 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 1321
Query 84516 CCCAC 84520
|||||
Sbjct 1322 CCCAC 1326
Score = 87.8 bits (96), Expect = 3e-12
Identities = 60/67 (90%), Gaps = 2/67 (3%)
Strand=Plus/Plus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGT--TCGA 84513
||||| ||||||||| || ||||||||| |||||||||||||||||||||||| ||||
Sbjct 1727 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAAGCTCTTAACCTTGTGGTCGTGGGTTCTCGA 1786
Query 84514 GCCCCAC 84520
|||||||
Sbjct 1787 GCCCCAC 1793
>seq148907
Length=14895
Score = 100 bits (110), Expect = 5e-16
Identities = 61/65 (94%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct 9012 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 8953
Query 84516 CCCAC 84520
|||||
Sbjct 8952 CCCAC 8948
>seq243797
Length=7834
Score = 95.1 bits (104), Expect = 2e-14
Identities = 60/65 (92%), Gaps = 0/65 (0%)
Strand=Plus/Minus
Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515
||||| ||||||||| || |||||||||||||||||||||||||||| |||||||||||
Sbjct 2035 GCCCGTCTAGCTCAGTTGGTAGAGCGCAAGGCTCTTAACCTTGTGGTCATGGGTTCGAGC 1976
Query 84516 CCCAC 84520
|||||
Sbjct 1975 CCCAC 1971
>seq44843
Length=10640
Score = 86.0 bits (94), Expect = 1e-11
Identities = 82/105 (78%), Gaps = 0/105 (0%)
Strand=Plus/Plus
Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417
|||||||||||||||||||| |||||||| || || ||||| ||||| || ||
Sbjct 5805 CCTTCCTTGTCTTGAATCTTGGCCTTGACATTGTCAATAGTGTCACTGGATTCAACCTCG 5864
Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462
| ||| |||||||| ||||| | || || ||||| |||||||||
Sbjct 5865 AGGGTTATGGTTTTACCCGTCAAAGTTTTCACGAAGATCTGCATT 5909
>seq36495
Length=6913
Score = 86.0 bits (94), Expect = 1e-11
Identities = 53/57 (93%), Gaps = 0/57 (0%)
Strand=Plus/Minus
Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCA 84519
||||||||| || |||| ||||||||||||||||||||||| |||||||||||||||
Sbjct 6090 TAGCTCAGTTGGTAGAGTGCAAGGCTCTTAACCTTGTGGTCCTGGGTTCGAGCCCCA 6034
>seq6742
Length=4968
Score = 84.2 bits (92), Expect = 4e-11
Identities = 86/110 (78%), Gaps = 2/110 (2%)
Strand=Plus/Plus
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCT 68411
|||| ||||||||||| |||||||| || ||||| ||||| || || ||| |||||
Sbjct 3855 GAATACCTTCCTTGTCCTGAATCTTCGCTTTGACATTGTCGATCGTATC-GCTGGATTCA 3913
Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| || | ||| ||||| || || || ||||| || ||||| ||||||||
Sbjct 3914 ACCTCAAGGGTTATGGTCTTCCCTGTTAGGGTTTTCACGAAGATCTGCAT 3963
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 918060559829600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |