Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pimpinellifolium_20[genbank_20GCA_5F000230315.1_202011-10- 06] 309,180 sequences; 688,247,059 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq16411 86.0 7e-12 >seq16411 Length=4982 Score = 86.0 bits (94), Expect = 7e-12 Identities = 194/290 (67%), Gaps = 14/290 (5%) Strand=Plus/Plus Query 8629 CGGCACATTGGCTCGTGAAGAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCCGGTA 8688 |||| |||||| | | ||||||||| ||| | || || | || |||||| || | Sbjct 134 CGGCGCATTGGTACACGGTGAATTACCGGGAAGCGTACGGGATATTCGCGTGCAATGGGA 193 Query 8689 TTCTCTTCAACCACGAGTCACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACC- 8747 ||||||||||||||||||| || ||||| || | |||||||||| | |||||| ||| Sbjct 194 TTCTCTTCAACCACGAGTCTCCACGTCGGGGTGAGAATTTCGTGACGAGGAAGATTACCC 253 Query 8748 -----GATGGTATCAAACAAATCGTCGCGGGT-GAGAGGGAGTTCATTGAATTGGGGAAC 8801 | || | | | |||||| || | |||| || | || ||||| || Sbjct 254 GGGCTGTAGGGAGGATAAAAATCG----GGCTACAGAGCAAGGTTTTT---TTGGGTAAT 306 Query 8802 CTCAACGCCGAGAGGGACTGGGGACACGCCAAGGACTATGTTGAAGCCATGTGGCTCGTA 8861 | | || ||||||||||| || |||||||| ||||| |||||| | | Sbjct 307 TTACAGGCGTCAAGGGACTGGGGCTTTGCTGGAGACTATGTAGAAGCAATGTGGATGATG 366 Query 8862 CTTCAACAAGAAGAGGCGGACGAATATGTCGTCGCGACGGGGGAGACACA 8911 || || ||||| | | ||||| || || || || |||| ||| |||| Sbjct 367 CTGCAGCAAGAGAAACCAGACGACTACGTTGTGGCAACGGAGGATTCACA 416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595044977674400