Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20pimpinellifolium_20[genbank_20GCA_5F000230315.1_202011-10-
06] 309,180 sequences; 688,247,059 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq260618 188 2e-42
seq260619 179 8e-40
seq250116 174 3e-38
seq261322 163 6e-35
seq183807 159 8e-34
seq269538 154 3e-32
seq45869 154 3e-32
seq30399 154 3e-32
seq227670 150 4e-31
seq218976 138 3e-27
seq164539 136 9e-27
seq68649 131 4e-25
seq29975 127 5e-24
seq142480 114 3e-20
seq256924 105 1e-17
seq6742 89.7 1e-12
seq44843 84.2 5e-11
>seq260618
Length=7988
Score = 188 bits (208), Expect = 2e-42
Identities = 175/222 (79%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| ||||| ||||| ||||| || || || || ||||||||||||||||| | ||
Sbjct 617 CTGAGCCTCAACACAAGATGAAGGGTTGATTCCTTCTGAATATTGTAATCGGCTAATGTC 558
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
|| |||||||| | |||||| || || || || | | ||| |||||||| || || ||
Sbjct 557 CTTCCATCTTCCAACTGCTTGCCAGCAAAAATCAACCTTTGCTGGTCTGGTGGGATACCC 498
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099
|||||||| ||||| || ||| ||||| ||||||||||| || |||||||| ||||||
Sbjct 497 TCTTTGTCCTGAATCTTGGCCTTTACGTTGTCAATGGTGTCGGAGCTTTCCACCTCAAGG 438
Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|||| ||||| || ||||| || || ||||| | |||||||
Sbjct 437 GTAATAGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCATT 396
Score = 161 bits (178), Expect = 2e-34
Identities = 169/222 (76%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|| ||| | || || | |||||| || ||||| || || || |||||||| ||||| ||
Sbjct 390 TCGGAGACGCAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGT 331
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| || || || || ||||| || || ||||| | | || |||||||| ||||| ||
Sbjct 330 ACGGCCGTCCTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACC 271
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||||||||| |||||||| ||| || || ||||||||||| ||||||||||| |||||
Sbjct 270 TTCTTTGTCCTGAATTTTGGCCTTAACATTGTCAATGGTGTCAGAACTTTCCACCTCAAG 211
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| | ||||| || ||||| || || || || | ||||||
Sbjct 210 GGTGATTGTCTTGCCAGTCAAGGTCTTCACAAAGATTTGCAT 169
Score = 120 bits (132), Expect = 7e-22
Identities = 113/144 (78%), Gaps = 0/144 (0%)
Strand=Plus/Minus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| || ||||| || || || |||||||| ||||| || || || || || |||||
Sbjct 144 GTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTCCTGCCGTCCTCAAGCTG 85
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| | | ||| |||||||| ||||||||||| |||||||| || ||
Sbjct 84 CTTGCCCGCAAAGATCAACCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTT 25
Query 195057 TTGCTTGACGTTCTCAATGGTGTC 195080
||| || || |||||||||||
Sbjct 24 AGCCTTAACATTGTCAATGGTGTC 1
>seq260619
Length=5677
Score = 179 bits (198), Expect = 8e-40
Identities = 162/204 (79%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
|||||| || || || || || || |||||||| ||||| || || || || || |||||
Sbjct 216 GTGAAGGGTTGATTCCTTCTGGATGTTGTAATCAGCAAGGGTCCTGCCGTCCTCAAGCTG 275
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| || || ||||| | | ||| |||||||| ||||||||||| |||||||| || ||
Sbjct 276 CTTGCCCGCAAAGATCAACCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTT 335
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
||| || || ||||||||||| || ||||| || |||||||| | |||||||||||
Sbjct 336 AGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAACCTCAAGGGTGATGGTCTTTCCTGT 395
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
||||||||| ||||| | ||||||
Sbjct 396 CAAAGTTTTCACGAAAATTTGCAT 419
Score = 165 bits (182), Expect = 2e-35
Identities = 159/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Plus
Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996
||| ||||| |||||||| ||||| |||||||| || ||||| | || ||||| |||||
Sbjct 444 GTGGAGAGTTGACTCTTTCTGAATGTTGTAATCAGCTAGAGTACGACCGTCTTCAAGCTG 503
Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056
||| ||||| ||||| || | || |||||||| ||||||||||| ||||| || || ||
Sbjct 504 CTTTCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCCTGGATCTT 563
Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116
|| || || ||||||||||| || |||||||| |||||||| | |||||||| ||
Sbjct 564 GGCTTTAACATTGTCAATGGTGTCTGAGCTTTCCACCTCAAGGGTGATAGTCTTTCCAGT 623
Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | |||||
Sbjct 624 GAGGGTTTTAACAAATATCTGCAT 647
Score = 158 bits (174), Expect = 3e-33
Identities = 150/192 (78%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 194950 TCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAG 195009
|| || || || |||||||| ||||| || || || || || |||||||| || || |||
Sbjct 1 TCCTTCTGGATGTTGTAATCAGCAAGGGTCCTGCCGTCCTCAAGCTGCTTGCCCGCAAAG 60
Query 195010 ATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTC 195069
|| | | ||| |||||||| ||||||||||| |||||||| || || ||| || ||
Sbjct 61 ATCAACCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTAACATTG 120
Query 195070 TCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACG 195129
||||||||||| || ||||| || |||||||| | |||||||| |||||||| || ||
Sbjct 121 TCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTTTCCAGTCAAAGTCTTCACA 180
Query 195130 AACACTTGCATT 195141
|| | |||||||
Sbjct 181 AAAATTTGCATT 192
>seq250116
Length=2524
Score = 174 bits (192), Expect = 3e-38
Identities = 164/209 (78%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| ||||| || ||||||||||| || |||||||| ||||| |||| ||||||||
Sbjct 195 ACAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATCTTCA 254
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || || || ||||| |||| || || ||||||||||||||||| |||||||||
Sbjct 255 AGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGA 314
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||||| || ||||||||||| ||||| || || ||||| || | ||||||
Sbjct 315 ATCTTAGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCAAGAGTGATGGTCTTT 374
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || || || | |||||
Sbjct 375 CCGGTGAGTGTCTTAACAAATATCTGCAT 403
Score = 140 bits (154), Expect = 7e-28
Identities = 136/175 (78%), Gaps = 0/175 (0%)
Strand=Plus/Plus
Query 194966 AATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGT 195025
|||| ||||| |||| |||||||| ||||| || || || ||||| || | || ||||
Sbjct 1 AATCAGCAAGTGTTCGGCCATCTTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGT 60
Query 195026 CTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAAC 195085
|||| ||||| ||||| |||||||||||||| ||||| || || |||||||| || |
Sbjct 61 CTGGGGGAATACCTTCCTTGTCTTGAATTTTAGCTTTGACATTATCGATGGTGTCTGAGC 120
Query 195086 TTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || || ||||| || | |||||||| |||| |||||| || || | ||||||
Sbjct 121 TCTCGACCTCAAGAGTTATAGTCTTTCCGGTCAGAGTTTTAACAAAGATTTGCAT 175
>seq261322
Length=6793
Score = 163 bits (180), Expect = 6e-35
Identities = 171/225 (76%), Gaps = 0/225 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| || |||||||| || || || ||||| || || || |||| ||||| |||
Sbjct 4369 ACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCCTCG 4428
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| ||||| || | ||| || |||||||| ||||||||||| |||||||||
Sbjct 4429 AGCTGCTTACCGGCGAAAATCAATCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTCTTGA 4488
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || ||||||||||| || || || || | ||||| |||||
Sbjct 4489 ATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTACCTCCAAGGTAATGGTCTTG 4548
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTTACTTGGTG 195156
|| |||| || || || || | ||||||| | ||||||||
Sbjct 4549 CCCGTCAGGGTCTTCACAAAGATCTGCATTTTTCACCACTTGGTG 4593
>seq183807
Length=6005
Score = 159 bits (176), Expect = 8e-34
Identities = 151/193 (78%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||||||||| |||||||| ||||| || |||||||| | ||| |||| ||||||||
Sbjct 5851 ACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGTAAGTGTTCGGCCATCTTCA 5792
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||| || || || ||||| || | || |||||||| | ||| ||||| ||||||| |
Sbjct 5791 AGCTATTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGAAATACCTTCCTTGTCTTCA 5732
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
||||| ||||| || ||||||||||| || || || || ||||| || | ||||||
Sbjct 5731 ATTTTAGCTTTGACATTATCAATGGTGTCTGAGCTCTCAACCTCAAGAGTTATAGTCTTT 5672
Query 195112 CCTGTCAAAGTTT 195124
|| |||| |||||
Sbjct 5671 CCGGTCAGAGTTT 5659
Score = 127 bits (140), Expect = 5e-24
Identities = 140/185 (76%), Gaps = 1/185 (1%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| || || || ||||| | ||| || |||||||| |||| ||| ||||||||
Sbjct 5635 ACAAGATGGAG-GTAGACTCGTCTTGGATGTTGTAATCAGCAACTGTTTGGCCATCTTCA 5577
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||| || || || ||||| || | || || ||||||||||||||||| |||||||||
Sbjct 5576 AGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGAATGCCTTCCTTGTCTTGA 5517
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || || || || ||||| ||||| || || || || ||||| || | ||||||
Sbjct 5516 ATCTTAGCTTTTACATTATCAATAGTGTCAGAGCTCTCGACCTCAAGAGTGATGGTCTTT 5457
Query 195112 CCTGT 195116
|| ||
Sbjct 5456 CCGGT 5452
Score = 102 bits (112), Expect = 2e-16
Identities = 103/134 (77%), Gaps = 0/134 (0%)
Strand=Plus/Minus
Query 195007 AAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACG 195066
||||| |||| || |||||||||||||| ||||| || || |||||||| ||| ||
Sbjct 6004 AAGATCAGTCTCTGCTGGTCTGGAGGAATCCCTTCCTTATCCTGAATTTTGGCCTTCACA 5945
Query 195067 TTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTT 195126
|| ||||| || || |||||||| ||||||||||| | |||||||| || | || ||
Sbjct 5944 TTGTCAATAGTATCGGAACTTTCAACTTCAAGGGTGATGGTCTTTCCAGTAAGTGTCTTG 5885
Query 195127 ACGAACACTTGCAT 195140
|| || | |||||
Sbjct 5884 ACAAAGATCTGCAT 5871
>seq269538
Length=12246
Score = 154 bits (170), Expect = 3e-32
Identities = 162/213 (76%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987
||| || || || ||||| ||||| || || || ||||| || |||||||| ||||| ||
Sbjct 425 CAACACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTCCTCCCGTC 366
Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047
|| || || ||||| || ||||| | || ||||||||||| ||||| || || |||||
Sbjct 365 CTCAAGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTC 306
Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGT 195107
|||||| ||| || || || |||||||| || ||||| || || || | |||| ||
Sbjct 305 TTGAATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACCTCCAATGTAATTGT 246
Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || |||||||| || || || | ||||||
Sbjct 245 CTTCCCAGTCAAAGTCTTGACAAAAATTTGCAT 213
Score = 131 bits (144), Expect = 4e-25
Identities = 144/192 (75%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
||||||||| || || || ||||| ||||| |||||||| || | || || ||||| ||
Sbjct 194 AACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCCAACGTCCTTCCATCCTC 135
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|| ||||| || || ||||| | || || |||||||||||||| || || ||||||||
Sbjct 134 AAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGGAATACCCTCCTTGTCTTG 75
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|| ||| || || || || || || || ||||| || || || | |||| |||||
Sbjct 74 GATCTTTGCTTTAACATTGTCGATAGTATCTGAACTCTCAACCTCCAAAGTAATTGTCTT 15
Query 195111 TCCTGTCAAAGT 195122
|||||||| ||
Sbjct 14 CCCTGTCAATGT 3
Score = 129 bits (142), Expect = 1e-24
Identities = 160/219 (73%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 194922 GAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCT 194981
||| |||| ||||| |||||||| |||||||| || || || || || ||||| || |
Sbjct 659 GAGCCTCAGGACAAGATGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGCAAGGGTGCG 600
Query 194982 CCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTC 195041
||||| || ||||||||||| || ||||| || | ||||| ||||| || || |||||
Sbjct 599 GCCATCCTCAAGCTGCTTACCAGCAAAGATGAGCCTCTGTTGATCTGGTGGGATCCCTTC 540
Query 195042 TTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
||||| || || ||| || || || ||||| || || || || ||||| || | ||
Sbjct 539 CTTGTCCTGTATCTTTGCTTTCACATTGTCAATAGTATCAGAGCTCTCCACCTCCAATGT 480
Query 195102 AACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| ||||| || || | ||| || || || | |||||
Sbjct 479 GATTGTCTTCCCAGTAAGAGTCTTCACAAAGATCTGCAT 441
>seq45869
Length=5042
Score = 154 bits (170), Expect = 3e-32
Identities = 152/195 (78%), Gaps = 6/195 (3%)
Strand=Plus/Plus
Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010
|||| ||||| |||||||| || ||||| | ||||||||||||||||| || |||||||
Sbjct 4375 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAGA 4434
Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCT 195070
| | ||| || ||||| || ||||| ||||| ||||||||||| || ||||| || |
Sbjct 4435 TCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTGT 4494
Query 195071 CAATGGTGTC---CGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTA 195127
|||| ||||| ||| ||| |||||||| || | |||||| || || | |||||| |
Sbjct 4495 CAATAGTGTCGCTCGA---TTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTCA 4551
Query 195128 CGAACACTTGCATTT 195142
|||| | |||||||
Sbjct 4552 CGAAGATCTGCATTT 4566
>seq30399
Length=1829
Score = 154 bits (170), Expect = 3e-32
Identities = 156/203 (77%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || |||||||| || || || ||||| || || || || | |||||||| | ||||
Sbjct 1175 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCTAGGGTGCGGCCATCTTCCAACTGC 1116
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| ||||| ||||| | | || |||||||| ||||||||||| || || || || ||
Sbjct 1115 TTTCCTGCAAAGATCAACCTCTGCTGGTCTGGGGGAATGCCTTCCTTATCCTGGATCTTA 1056
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||||||||| ||||||||||| || ||||| || |||||||||| |||||| || ||
Sbjct 1055 GCCTTGACGTTGTCAATGGTGTCTGAGCTTTCGACCTCAAGGGTAATCGTCTTACCCGTG 996
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| ||| || ||||| | |||||
Sbjct 995 AGAGTCTTCACGAAGATCTGCAT 973
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||||||||| || ||||| || || || ||||| |||||||| || | || || |||
Sbjct 1637 ACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGCAAGGGTGCGGCCGTCCTCG 1578
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| ||||| || | | || |||||||| ||||| || || ||||| ||
Sbjct 1577 AGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGGGGAATTCCCTCCTTGTCCTGG 1518
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || ||||||||||| || |||||||| || | || | ||||||
Sbjct 1517 ATCTTAGCCTTAACATTATCAATGGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTCTTT 1458
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | || || || || | |||||
Sbjct 1457 CCGGTGAGGGTCTTAACAAAAATCTGCAT 1429
Score = 136 bits (150), Expect = 9e-27
Identities = 152/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997
|| || |||||||| || || || |||||||| || ||||| | || || || | ||||
Sbjct 947 TGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGCTAGAGTACGTCCGTCCTCCAACTGC 888
Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057
|| || ||||||||||| | ||| || || || ||||| ||||| || || || || ||
Sbjct 887 TTTCCAGCGAAGATAAGCCTTTGCTGATCCGGGGGAATTCCTTCCTTATCCTGGATCTTA 828
Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117
||| ||||| || || || || ||||||||||| || ||||| | |||||||| ||
Sbjct 827 GCCTTAACGTTGTCGATTGTATCAGAACTTTCCACCTCTAGGGTGATAGTCTTTCCGGTG 768
Query 195118 AAAGTTTTTACGAACACTTGCAT 195140
| |||||| || || | |||||
Sbjct 767 AGAGTTTTCACAAAGATCTGCAT 745
Score = 134 bits (148), Expect = 3e-26
Identities = 155/209 (74%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
||||| || || || ||||| || || || ||||| || || || || | ||||| |||
Sbjct 1409 ACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGACCATCCTCG 1350
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || |||||||| | | || |||||||| || || ||||| || || ||
Sbjct 1349 AGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGGGGGATCCCTTCCTTATCCTGG 1290
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| ||||| ||||||||||| || |||||||| || | || | ||||||
Sbjct 1289 ATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCCACCTCCAAAGTGATGGTCTTT 1230
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||| || ||||| | |||||
Sbjct 1229 CCGGTAAGAGTCTTAACGAAGATCTGCAT 1201
Score = 96.9 bits (106), Expect = 8e-15
Identities = 116/158 (73%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
||||| ||||||||||| || || || || | | || |||||||| ||||| || ||
Sbjct 1814 CCATCCTCGAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCC 1755
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|||||||| || || |||||| || ||||||||||| || || || || || |||||
Sbjct 1754 TTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAGGGTG 1695
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || || || || | || || || || | ||||||
Sbjct 1694 ATGGTTTTCCCGGTAAGGGTCTTCACAAAGATTTGCAT 1657
>seq227670
Length=5094
Score = 150 bits (166), Expect = 4e-31
Identities = 160/210 (76%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990
|||||| || | ||||||||||| ||||||||||| || || || || || ||||| ||
Sbjct 267 AACAAGATGTAAGGTGGACTCTTTCTGAATATTGTAGTCAGCCAGGGTCCTTCCATCCTC 208
Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050
|| ||||| | | ||||| |||| || |||||||||||||| ||||| || || ||
Sbjct 207 AAGTTGCTTGC--GGAAAGATCAGTCTCTGCTGGTCTGGAGGAATCCCTTCCTTATCCTG 150
Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110
|||||| ||| || || ||||| || || |||||||| ||||||||||| | |||||
Sbjct 149 AATTTTGGCCTTCACATTGTCAATAGTATCGGAACTTTCAACTTCAAGGGTGATGGTCTT 90
Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||| || | || || || || | |||||
Sbjct 89 TCCAGTAAGTGTCTTGACAAAGATCTGCAT 60
Score = 100 bits (110), Expect = 6e-16
Identities = 149/209 (71%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || |||||||| |||||||| || |||||||| || ||||| | | ||||| ||
Sbjct 958 ACGAGATGAAGAGTAGACTCTTTGTGGATATTGTAGTCTGCAAGGATGCGACCATCCTCA 899
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| || |||||||| | |||| ||||| ||||| | ||| ||||| ||
Sbjct 898 AGCTGCTTACCAGCAAAGATAAGCCTCCGTTGATCTGGTGGAATCCTTTCCTTGTCCTGT 839
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
| | |||||| | ||| | || || || || | || || | || | |||||
Sbjct 838 A-TCCTTGCTT-TCACAGTCAGTAGTATCTGAGCTCTTAACCTCCAATGTGATTGTCTTC 781
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| |||| ||| || || || | |||||
Sbjct 780 CCAGTCAGAGTCTTCACAAAGATCTGCAT 752
>seq218976
Length=24853
Score = 138 bits (152), Expect = 3e-27
Identities = 156/209 (75%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || ||||||||||| || || || ||||| ||||||||||| | ||||| ||
Sbjct 11075 ACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTACGACCATCCTCA 11016
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||| || | || || |||||||| ||||| ||||| ||||| ||
Sbjct 11015 AGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCCTGG 10956
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || || || || || |||||||| ||| || || || ||||| | ||||||
Sbjct 10955 ATCTTGGCTTTCACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTGATCGTCTTC 10896
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||||| ||||| | |||||
Sbjct 10895 CCCGTTAGGGTTTTCACGAAGATCTGCAT 10867
>seq164539
Length=4213
Score = 136 bits (150), Expect = 9e-27
Identities = 156/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| || |||||||| || || |||||||| || ||||| || | ||||| ||
Sbjct 3959 ACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCAGCAAGGGTGCGGCCATCCTCA 4018
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| ||||| || | | || |||||||| || || || || ||||| |||
Sbjct 4019 AGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTGA 4078
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || || || || || |||||||| ||||| ||||| || | || | |||||
Sbjct 4079 ATCTTAGCTTTCACATTGTCGATGGTGTCAGAACTCTCCACCTCCAAAGTGATGGTCTTC 4138
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| ||||| || || || || | ||||||
Sbjct 4139 CCGGTCAAGGTCTTCACAAAGATCTGCATT 4168
>seq68649
Length=3576
Score = 131 bits (144), Expect = 4e-25
Identities = 164/225 (73%), Gaps = 0/225 (0%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|||||||| || ||||| || || || || ||||| || || || |||| ||||| ||
Sbjct 2504 ACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGCTAGCGTTCGGCCATCCTCA 2445
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
|||||||| || ||||| || | | || |||||||| ||||||||||| ||||| |||
Sbjct 2444 AGCTGCTTTCCCGCGAAAATCAACCTCTGCTGGTCTGGTGGAATGCCTTCCTTGTCCTGA 2385
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111
|| || ||| || || |||||||| ||||| || || || | ||||| |||||
Sbjct 2384 ATCTTAGCCTTAACATTGTCAATGGTATCCGATGACTCTACCTCTAAGGTAATAGTCTTG 2325
Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCATTTATGGTTACTTGGTG 195156
|| || | || || || || | ||||||| | ||||||||
Sbjct 2324 CCCGTTAGGGTCTTCACAAAGATCTGCATTTTTCACCACTTGGTG 2280
>seq29975
Length=3370
Score = 127 bits (140), Expect = 5e-24
Identities = 159/218 (73%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|| ||||| ||||| |||| || ||||| ||||||||||||||||| ||||| ||
Sbjct 2310 AGACTCAAGACAAGATGAATTGTAGACTCCTTTTGAATATTGTAATCAGCAAGTGTATGA 2369
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||| | | || || || | || | | || |||||| |||| ||||| ||||||
Sbjct 2370 TCATCCTTAAATTGTTTTCCACCAAATACTAATCTTTGTTGATCTGAGGGAATTCCTTCT 2429
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
||||||| ||| ||| || || || | |||||||| ||||| | ||| || || |||
Sbjct 2430 TTGTCTTCAATCTTTGCTTTAACATTGTTAATGGTGTTGGAACTCTTCACATCCAGAGTA 2489
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| |||||||| | | |||||| || || | ||||||
Sbjct 2490 ATGGTCTTTCCAATGAGAGTTTTAACAAAGATTTGCAT 2527
>seq142480
Length=7342
Score = 114 bits (126), Expect = 3e-20
Identities = 104/131 (79%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| |||| ||||||||||||||| || ||||| ||||| |||||||| || || |||
Sbjct 4939 CTGAGCCTCAGAACAAGGTGAAGAGTTGATTCTTTCTGAATGTTGTAATCAGCCAGGGTT 4998
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
|| |||||||| | || || || || || || |||| || || || ||||| ||||||
Sbjct 4999 CTACCATCTTCCAATTGTTTTCCAGCAAAAATCAGTCTCTGCTGATCAGGAGGTATGCCT 5058
Query 195040 TCTTTGTCTTG 195050
||||| || ||
Sbjct 5059 TCTTTATCCTG 5069
>seq256924
Length=5511
Score = 105 bits (116), Expect = 1e-17
Identities = 152/210 (72%), Gaps = 6/210 (3%)
Strand=Plus/Minus
Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991
|| || || ||||| || | ||| || || |||| || || | || | ||||| |||
Sbjct 4515 ACTAGATGTAGAGTTGATTTTTTCTGGATGCTGTAGTCCGCCAAGGTGCGGCCATCCTCG 4456
Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051
||||||||||| || || || || | ||| ||||||||||| || ||||||||||||||
Sbjct 4455 AGCTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGAGGGATTCCTTCTTTGTCTTGT 4396
Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGT--CCGAACTTTCCACTTCAAGGGTAACCGTCT 195109
|| || ||| | || || || || | | ||| ||| ||||| || |||| || |
Sbjct 4395 ATCTTGGCCTTAGCATTGTCGATAGTATTGCTGAA--TTCGACTTCCAGAGTAATGGT-T 4339
Query 195110 TTCCTGTCAAAGTTTTTACGAACA-CTTGC 195138
|| ||| | |||||| ||||| | |||||
Sbjct 4338 TTACTGGTAGAGTTTTCACGAATATCTTGC 4309
>seq6742
Length=4968
Score = 89.7 bits (98), Expect = 1e-12
Identities = 73/89 (82%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010
||||||||||||| ||||| || || || | ||||||||| ||||| ||||| || ||||
Sbjct 3641 CTTTTTGAATATTATAATCCGCCAGTGTACGCCCATCTTCAAGCTGTTTACCAGCAAAGA 3700
Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| ||||| || ||||| || ||||| |||
Sbjct 3701 TCAGTCGCTGCTGGTCCGGTGGAATACCT 3729
>seq44843
Length=10640
Score = 84.2 bits (92), Expect = 5e-11
Identities = 72/89 (81%), Gaps = 0/89 (0%)
Strand=Plus/Plus
Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010
|||| ||||| || || || |||||||| | |||||||| ||||||||||| || || |
Sbjct 5619 CTTTCTGAATGTTATAGTCAGCAAGAGTGCGGCCATCTTCTAGCTGCTTACCAGCAAAAA 5678
Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| || | ||| |||||||||||||| |||
Sbjct 5679 TCAGCCTTTGCTGGTCTGGAGGAATTCCT 5707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1105086534261060
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |