Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pimpinellifolium_20[genbank_20GCA_5F000230315.1_202011-10- 06] 309,180 sequences; 688,247,059 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq300666 95.1 1e-14 >seq300666 Length=9326 Score = 95.1 bits (104), Expect = 1e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 34610 TTCTACGTCGCGAATGGGGAGCTGTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGG 34669 || || || || ||||||||||| ||||| ||| | ||||| ||||| | || ||||| Sbjct 4775 TTTTATGTAGCCAATGGGGAGCTATCCTGTCAGATGTATCAGCGATCTGCCGATATGGGT 4834 Query 34670 TTAGGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTC 34729 || || ||||| ||||||||||| ||| || |||| || | |||||| ||||||||| Sbjct 4835 TTGGGAGTGCCATTCAACATTGCATCTTATGCCTTGCTGACATGCATGATAGCTCATGTC 4894 Score = 95.1 bits (104), Expect = 1e-14 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 6616 GACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAA 6675 ||||||||| |||||| | || |||| || ||| ||||||||||| ||||| || || Sbjct 4894 GACATGAGCTATCATGCATGTCAGCAAGGCATAAGATGCAATGTTGAATGGCACTCCCAA 4835 Query 6676 CCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAA 6735 ||||| || | ||||| ||||| | ||| ||||| ||||||||||| || || || || Sbjct 4834 ACCCATATCGGCAGATCGCTGATACATCTGACAGGATAGCTCCCCATTGGCTACATAAAA 4775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 446529977889600