Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20pimpinellifolium_20[genbank_20GCA_5F000230315.1_202011-10- 06] 309,180 sequences; 688,247,059 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq250116 179 8e-40 seq218976 179 8e-40 seq30399 172 1e-37 seq164539 163 6e-35 seq269538 161 2e-34 seq261322 159 7e-34 seq183807 159 7e-34 seq45869 159 7e-34 seq260619 158 3e-33 seq68649 150 4e-31 seq260618 143 6e-29 seq227670 127 4e-24 seq256924 118 2e-21 seq208872 95.1 3e-14 seq44843 93.3 9e-14 seq29975 91.5 3e-13 seq239720 84.2 5e-11 >seq250116 Length=2524 Score = 179 bits (198), Expect = 8e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || ||||| | || ||||||||||||||||| |||||| Sbjct 177 CCACCACGTAGACGGAGGACAAGATGAAGGGTAGACTCTTTTTGGATGTTGTAATCAGCA 236 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || |||||||| || || |||||||| |||||||||| | || || || ||| Sbjct 237 AGTGTTCGGCCATCTTCAAGCTGTTTCCCAGCAAAGATCAGTCTCTGCTGATCTGGAGGA 296 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||| ||||| ||||| || |||| || ||||| ||| ||||| Sbjct 297 ATGCCTTCCTTGTCTTGAATCTTAGCTTTGACATTATCAATGGTGTCAGAACTCTCGACC 356 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || |||||||| ||||| || || | |||||||| ||||||||||| Sbjct 357 TCAAGAGTGATGGTCTTTCCGGTGAGTGTCTTAACAAATATCTGCAT 403 Score = 140 bits (154), Expect = 7e-28 Identities = 137/174 (79%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 282927 TCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCA 282986 |||||||| || |||||||| || || |||||||| |||||||||| | || ||||| Sbjct 3 TCAGCAAGTGTTCGGCCATCTTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCT 62 Query 282987 CCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT 283046 |||||||| ||||||||||| || || ||||| || ||||||| ||||| | |||| Sbjct 63 GGGGGAATACCTTCCTTGTCTTGAATTTTAGCTTTGACATTATCGATGGTGTCTG-AGCT 121 Query 283047 -TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || ||||| || ||||| || |||| ||| ||||| || || ||||| Sbjct 122 CTCGACCTCAAGAGTTATAGTCTTTCCGGTCAGAGTTTTAACAAAGATTTGCAT 175 >seq218976 Length=24853 Score = 179 bits (198), Expect = 8e-40 Identities = 179/232 (77%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || ||||| | ||| || || |||||||||||||| || Sbjct 11094 ACCACCACGGAGACGGAGCACGAGATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGC 11035 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || || |||||||| || || || ||||| || |||||||| || ||||| || Sbjct 11034 AAGAGTACGACCATCCTCAAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCTGGGGG 10975 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| |||||||| ||||| || | ||||| ||||| |||| || || Sbjct 10974 AATCCCTTCCTTGTCCTGGATCTTGGCTTTCACATTGTCGATGGTGTCGGAAGACTCAAC 10915 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 || || ||||||||||| ||||| | || || ||||| |||||||| ||| Sbjct 10914 CTCTAGGGTGATCGTCTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTTC 10863 >seq30399 Length=1829 Score = 172 bits (190), Expect = 1e-37 Identities = 175/228 (77%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| ||| | ||| || || ||||||||||||||||| Sbjct 1200 ACCACCACGGAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 1141 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||||||||| || | || || || ||||||||||| | || ||||| || Sbjct 1140 TAGGGTGCGGCCATCTTCCAACTGCTTTCCTGCAAAGATCAACCTCTGCTGGTCTGGGGG 1081 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| || |||||||| || || ||| | || || ||||| || |||||| Sbjct 1080 AATGCCTTCCTTATCCTGGATCTTAGCCTTGACGTTGTCAATGGTGTCTGAGCTTTCGAC 1021 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || |||||||||||||| | |||||| ||||| |||||||| Sbjct 1020 CTCAAGGGTAATCGTCTTACCCGTGAGAGTCTTCACGAAGATCTGCAT 973 Score = 154 bits (170), Expect = 3e-32 Identities = 171/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || ||||| | || || || ||||||||||||||||| Sbjct 1428 ACCACCACGGAGACGGAGGACAAGATGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGC 1369 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || ||||| |||||||| || || || || || |||||||| | || ||||| || Sbjct 1368 CAGGGTGCGACCATCCTCGAGCTGCTTTCCAGCGAAGATCAACCTCTGCTGGTCTGGGGG 1309 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 || || ||||| || |||||||| || || ||| | || || ||||| || ||| || Sbjct 1308 GATCCCTTCCTTATCCTGGATCTTAGCCTTCACGTTGTCAATGGTGTCGGAGCTTTCCAC 1249 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| ||||| || || | |||||||||||| |||||||| Sbjct 1248 CTCCAAAGTGATGGTCTTTCCGGTAAGAGTCTTAACGAAGATCTGCAT 1201 Score = 150 bits (166), Expect = 4e-31 Identities = 170/228 (75%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | || || || |||||||||||||| || Sbjct 1656 ACCACCACGTAGACGGAGGACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCGGC 1597 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||| ||||| || || || || || || ||||| | || ||||| || Sbjct 1596 AAGGGTGCGGCCGTCCTCGAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGGGG 1537 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| ||||||||||| |||||||| || || || |||| || ||||| || ||| || Sbjct 1536 AATTCCCTCCTTGTCCTGGATCTTAGCCTTAACATTATCAATGGTGTCGGAGCTTTCCAC 1477 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | |||||| ||||| || || | |||||||| || |||||||| Sbjct 1476 CTCCAAAGTGATGGTCTTTCCGGTGAGGGTCTTAACAAAAATCTGCAT 1429 Score = 127 bits (140), Expect = 4e-24 Identities = 165/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || |||| ||| | ||| || || ||||||||||| ||||| Sbjct 972 ACCACCACGTAGACGGAGCACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAATCAGC 913 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || || || ||||| | || || || || ||||| | | ||| || || || Sbjct 912 TAGAGTACGTCCGTCCTCCAACTGCTTTCCAGCGAAGATAAGCCTTTGCTGATCCGGGGG 853 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||| || |||||||| || || ||| | ||||| || || ||| ||| || Sbjct 852 AATTCCTTCCTTATCCTGGATCTTAGCCTTAACGTTGTCGATTGTATCAGAACTTTCCAC 793 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||| || || || |||||||| Sbjct 792 CTCTAGGGTGATAGTCTTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 745 Score = 111 bits (122), Expect = 3e-19 Identities = 125/165 (76%), Gaps = 2/165 (1%) Strand=Plus/Minus Query 282936 GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATA 282995 |||||||||||||| || || || || ||||| ||||| | || ||||| |||||| Sbjct 1820 GTGCGGCCATCCTCGAGCTGCTTGCCAGCAAAAATCAACCTCTGCTGGTCTGGGGGAATA 1761 Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGACTTC 283054 |||||||||||||||||||| || || || | || || |||| || |||| || || || Sbjct 1760 CCCTCCTTGTCTTGGATCTTGGCCTTGACATTGTCAATGGTGT-CGGAGCTCTCAACCTC 1702 Query 283055 GAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||| || || || || | ||||| || || || ||||| Sbjct 1701 CAGGGTGATGGTTTTCCCGGTAAGGGTCTTCACAAAGATTTGCAT 1657 >seq164539 Length=4213 Score = 163 bits (180), Expect = 6e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 |||||||||| || || || || || || | ||| || || ||||| |||||||||| Sbjct 3939 AACCACCACGGAGACGGAGGACAAGGTGCAGGGTGGACTCCTTCTGGATATTGTAGTCAG 3998 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 |||| |||||||||||||| || || || || || || ||||| | || ||||| | Sbjct 3999 CAAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCGAAAATCAACCTCTGCTGGTCTGGTG 4058 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || ||||||||||| || ||||| ||||| || | ||||| ||||| ||| || | Sbjct 4059 GGATCCCCTCCTTGTCCTGAATCTTAGCTTTCACATTGTCGATGGTGTCAGAACTCTCCA 4118 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATT 283100 | || | |||||| ||||| || ||||| ||||| || || ||||||||| Sbjct 4119 CCTCCAAAGTGATGGTCTTCCCGGTCAAGGTCTTCACAAAGATCTGCATT 4168 >seq269538 Length=12246 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCT 282950 |||||||| | || || || |||||||||||||| ||||| || | || ||||| Sbjct 421 ACCAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCTGCAAGAGTCCTCCCGTCCTCA 362 Query 282951 AGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGG 283010 |||||||| || |||||||||||||| |||||||| |||||||||||||||||||| Sbjct 361 AGTTGTTTACCAGCAAAGATCAAACGCTGTTGGTCTGGGGGAATACCCTCCTTGTCTTGA 302 Query 283011 ATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTA 283070 ||||||||||| || | || || || || ||| || || || | || || ||||| Sbjct 301 ATCTTTGCTTTCACATTGTCAATGGTATCTGAACTCTCAACCTCCAATGTAATTGTCTTC 242 Query 283071 CCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || ||||||||||| || || || ||||| Sbjct 241 CCAGTCAAAGTCTTGACAAAAATTTGCAT 213 Score = 150 bits (166), Expect = 4e-31 Identities = 160/211 (76%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | |||||||| || || || | || |||||| || |||||||| || || Sbjct 211 CCACCTCTAAGGCGAAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCC 152 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||| | |||||||| ||||| || || ||||||||||| | || ||||| ||| Sbjct 151 AACGTCCTTCCATCCTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGGA 92 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||||||||||||||||||||| || | |||||||| || ||| || || Sbjct 91 ATACCCTCCTTGTCTTGGATCTTTGCTTTAACATTGTCGATAGTATCTGAACTCTCAACC 32 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCT 283083 || | ||| || ||||| || ||||| |||| Sbjct 31 TCCAAAGTAATTGTCTTCCCTGTCAATGTCT 1 Score = 136 bits (150), Expect = 8e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||| ||||| || | || || ||||| | || ||||| |||||||| ||||| || Sbjct 668 ACCGCCACGGAGCCTCAGGACAAGATGAAGAGTAGACTCTTTCTGGATGTTATAGTCTGC 609 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| |||||||||||||| || || || || |||||||| | | ||||| || || Sbjct 608 AAGGGTGCGGCCATCCTCAAGCTGCTTACCAGCAAAGATGAGCCTCTGTTGATCTGGTGG 549 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 || || |||||||| || ||||||||||| || | || ||||| || | |||| || | Sbjct 548 GATCCCTTCCTTGTCCTGTATCTTTGCTTTCACATTGTCAATAGTATCAG-AGCTCTCCA 490 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || | ||||| ||||| || || | |||||| || || |||||||| Sbjct 489 CCTCCAATGTGATTGTCTTCCCAGTAAGAGTCTTCACAAAGATCTGCAT 441 >seq261322 Length=6793 Score = 159 bits (176), Expect = 7e-34 Identities = 174/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || || || || || || | ||| || || ||||||||||||||||| Sbjct 4350 ACCACCACGGAGACGGAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGC 4409 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || ||||| || ||||| || || ||||| || Sbjct 4410 TAGCGTTCGGCCATCCTCGAGCTGCTTACCGGCGAAAATCAATCGCTGCTGGTCTGGTGG 4469 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || ||||||||||| ||||| || || || | || || ||||| || | || || Sbjct 4470 AATGCCTTCCTTGTCTTGAATCTTAGCCTTAACATTGTCAATGGTGTCTGATGACTCTAC 4529 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || | || || ||||| ||||||| ||||| || || ||||||||||| Sbjct 4530 CTCCAAGGTAATGGTCTTGCCCGTCAGGGTCTTCACAAAGATCTGCATTTT 4580 >seq183807 Length=6005 Score = 159 bits (176), Expect = 7e-34 Identities = 176/229 (77%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || ||||| | || || | |||||||||||| |||||| Sbjct 5653 CCACCACGTAGACGGAGGACAAGATGGAG-GTAGACTCGTCTTGGATGTTGTAATCAGCA 5595 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | || ||||||| || || |||||||| |||||||||| | || || || ||| Sbjct 5594 ACTGTTTGGCCATCTTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGATCTGGAGGA 5535 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || || ||||||||||| ||||| |||||||| |||| |||||||| | |||| ||||| Sbjct 5534 ATGCCTTCCTTGTCTTGAATCTTAGCTTTTACATTATCAATAGTGTCAG-AGCTCTCGAC 5476 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTT-AACGAATATCTGCAT 283099 || |||||||| ||||| || || | ||||| ||| ||||||||||| Sbjct 5475 CTCAAGAGTGATGGTCTTTCCGGTGAGCGTCTTAAACAAATATCTGCAT 5427 Score = 143 bits (158), Expect = 6e-29 Identities = 160/211 (76%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| |||||||| || || || | ||| || |||||||||||||| |||| Sbjct 5870 ACCACCACGAAGGCGAAGGACAAGGTGAAGGGTGGACTCCTTTTGGATGTTGTAATCAGT 5811 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||| || |||||||| || || | |||||| |||||||||| | || ||||| | Sbjct 5810 AAGTGTTCGGCCATCTTCAAGCTATTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGA 5751 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 |||||| |||||||||| || || ||||| || |||| || ||||| | |||| || | Sbjct 5750 AATACCTTCCTTGTCTTCAATTTTAGCTTTGACATTATCAATGGTGTCTG-AGCTCTCAA 5692 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGT 283081 | || ||||| || ||||| || |||| ||| Sbjct 5691 CCTCAAGAGTTATAGTCTTTCCGGTCAGAGT 5661 >seq45869 Length=5042 Score = 159 bits (176), Expect = 7e-34 Identities = 151/193 (78%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 |||| || |||||||| ||||| || || || ||||| || || || || ||||| |||| Sbjct 4375 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAGA 4434 Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTAT 283029 |||| || || ||||| |||||||| ||||||||||| ||||| ||||| || | | Sbjct 4435 TCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTGT 4494 Query 283030 CGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGA 283089 | |||||||| | ||| ||||| || ||||||||||| ||||| | ||| || |||| Sbjct 4495 CAATAGTGTCGCTCGATTCAACTTCAAGCGTGATCGTCTTCCCCGTAAGAGTTTTCACGA 4554 Query 283090 ATATCTGCATTTT 283102 | ||||||||||| Sbjct 4555 AGATCTGCATTTT 4567 >seq260619 Length=5677 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| || | || ||| || ||||||||||| |||||| Sbjct 193 CCACCACGAAGACGGAGCACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCAGCA 252 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||| ||||| || || || || ||||||||||| | ||| ||||| ||| Sbjct 253 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCCGCAAAGATCAACCTTTGCTGGTCTGGGGGA 312 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||||||||||||||| || || || | || || ||||| || ||| || Sbjct 313 ATGCCTTCCTTGTCTTGGATCTTAGCCTTAACATTGTCAATGGTGTCAGAGCTTTCAACC 372 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || |||||||| || ||||| || ||||| Sbjct 373 TCAAGGGTGATGGTCTTTCCTGTCAAAGTTTTCACGAAAATTTGCAT 419 Score = 149 bits (164), Expect = 1e-30 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || ||||||||||| |||||||| || | ||| ||||| || || || || |||||| Sbjct 1 TCCTTCTGGATGTTGTAATCAGCAAGGGTCCTGCCGTCCTCAAGCTGCTTGCCCGCAAAG 60 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 ||||| | ||| ||||| ||||| || ||||||||||||||||| || || || | Sbjct 61 ATCAACCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCTTGGATCTTAGCCTTAACATTG 120 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||||| || ||| || || || ||||| ||||| || ||||||||||| || Sbjct 121 TCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTCTTTCCAGTCAAAGTCTTCACA 180 Query 283089 AATATCTGCATT 283100 || || |||||| Sbjct 181 AAAATTTGCATT 192 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || |||| || | || ||||| || |||||||| ||||| Sbjct 421 CCACCACGAAGACGGAGCACCAAGTGGAGAGTTGACTCTTTCTGAATGTTGTAATCAGCT 480 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || || || || || || || |||||||||| | || ||||| ||| Sbjct 481 AGAGTACGACCGTCTTCAAGCTGCTTTCCTGCAAAGATCAGCCTCTGCTGGTCTGGGGGA 540 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || |||||||| |||||||| ||||| || | || || ||||| || ||| || Sbjct 541 ATGCCTTCCTTGTCCTGGATCTTGGCTTTAACATTGTCAATGGTGTCTGAGCTTTCCACC 600 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | || ||||| ||||||||||| Sbjct 601 TCAAGGGTGATAGTCTTTCCAGTGAGGGTTTTAACAAATATCTGCAT 647 >seq68649 Length=3576 Score = 150 bits (166), Expect = 4e-31 Identities = 172/231 (74%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| || ||||| || || || | ||| ||| || ||||||||||||||||| Sbjct 2523 ACCACCACGGAGACGAAGGACAAGGTGGAGGGTGGATTCCTTCTGGATGTTGTAGTCAGC 2464 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 ||||| ||||||||||| || || || || || || ||||| | || ||||| || Sbjct 2463 TAGCGTTCGGCCATCCTCAAGCTGCTTTCCCGCGAAAATCAACCTCTGCTGGTCTGGTGG 2404 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||| || |||||||| || ||||| || || || | || || || ||||| | || || Sbjct 2403 AATGCCTTCCTTGTCCTGAATCTTAGCCTTAACATTGTCAATGGTATCCGATGACTCTAC 2344 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 || | || || ||||| ||||| | ||||| || || ||||||||||| Sbjct 2343 CTCTAAGGTAATAGTCTTGCCCGTTAGGGTCTTCACAAAGATCTGCATTTT 2293 >seq260618 Length=7988 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || || || |||| || | || || || ||||||||||| |||||| Sbjct 395 CCACCTCGGAGACGCAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCA 336 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||| ||||| ||||| || |||||||||||||| | || ||||| ||| Sbjct 335 AGGGTACGGCCGTCCTCAAGTTGCTTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGA 276 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| || ||||| || || || || || || | || || ||||| ||| ||| || Sbjct 275 ATACCTTCTTTGTCCTGAATTTTGGCCTTAACATTGTCAATGGTGTCAGAACTTTCCACC 216 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || ||||| ||||| || || || ||||| Sbjct 215 TCAAGGGTGATTGTCTTGCCAGTCAAGGTCTTCACAAAGATTTGCAT 169 Score = 129 bits (142), Expect = 1e-24 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 282871 AACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG 282930 |||||||||| || || || || || || || || || ||||||||||||||||| | Sbjct 853 AACCACCACGGAGACGGAGGACAAGGTGCAAAGTAGACTCCTTTTGGATGTTGTAGTCCG 794 Query 282931 CAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCG 282990 | || || | ||||| || ||||| ||||| |||||||||| | || ||||| | Sbjct 793 CCAGAGTCCTTCCATCTTCAAGTTGCTTCCCTGCAAAGATCAGTCTCTGCTGGTCCGGTG 734 Query 282991 GAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGA 283050 | || ||||||||||| || || || || || || | || || || || ||| || | Sbjct 733 GGATTCCCTCCTTGTCCTGAATTTTAGCCTTCACATTGTCAATGGTATCAGAACTCTCCA 674 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | || | ||| || || || || ||||| ||||| || || |||||||| Sbjct 673 CCTCCAAAGTTATGGTTTTCCCAGTCAAGGTCTTCACAAAAATCTGCAT 625 Score = 113 bits (124), Expect = 9e-20 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| || || ||||| |||| || | || || || ||||||||||| |||||| Sbjct 167 CCACCGCGAAGACGAAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCA 108 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | ||| ||||| || || || || ||||||||||| | ||| ||||| ||| Sbjct 107 AGGGTCCTGCCGTCCTCAAGCTGCTTGCCCGCAAAGATCAACCTTTGCTGGTCTGGGGGA 48 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTC 283039 || || ||||||||||||||||| || || || | || || ||||| Sbjct 47 ATGCCTTCCTTGTCTTGGATCTTAGCCTTAACATTGTCAATGGTGTC 1 >seq227670 Length=5094 Score = 127 bits (140), Expect = 4e-24 Identities = 165/227 (73%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||| |||| || |||||||| ||| ||||| || || ||||||||||| Sbjct 284 CCACCCCTCAGATGAAGAACAAGATGTAAGGTGGACTCTTTCTGAATATTGTAGTCAGCC 225 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | |||||||| ||||| || | | |||||||| | || ||||| ||| Sbjct 224 AGGGTCCTTCCATCCTCAAGTTGCTTGC--GGAAAGATCAGTCTCTGCTGGTCTGGAGGA 167 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| || || || || || || || | || ||||| || ||| ||| ||| Sbjct 166 ATCCCTTCCTTATCCTGAATTTTGGCCTTCACATTGTCAATAGTATCGGAACTTTCAACT 107 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || || | ||||| || || |||||||| Sbjct 106 TCAAGGGTGATGGTCTTTCCAGTAAGTGTCTTGACAAAGATCTGCAT 60 Score = 111 bits (122), Expect = 3e-19 Identities = 162/228 (71%), Gaps = 1/228 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | || ||||| || || || | ||| | ||| || |||||||| || || Sbjct 513 CCACCTCTAAGACGAAGAACAAGGTGCAGCGTTGACTGTTTCTGAATGTTGTAATCTGCC 454 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | | | ||||| || ||||| | || ||||| ||||| | || |||| ||| Sbjct 453 AAGATCCTTCCATCTTCAAGTTGCTCTCCAGCAAACATCAATCTCTGCTGGTTCGGAGGA 394 Query 282993 ATACCCTCC-TTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGAC 283051 ||||||||| |||||||||| ||||||||| || | | ||| || || ||| || || Sbjct 393 ATACCCTCCTTTGTCTTGGACCTTTGCTTTAACATTGTTGATGGTATCTGAACTCTCAAC 334 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || | ||| || ||||| || ||||| |||||||| |||| ||||| Sbjct 333 CTCCAAAGTAATTGTCTTCCCTGTCAATGTCTTAACATATATTTGCAT 286 >seq256924 Length=5511 Score = 118 bits (130), Expect = 2e-21 Identities = 154/210 (73%), Gaps = 5/210 (2%) Strand=Plus/Minus Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 || || ||||||| || || ||| |||||| ||||||| || | |||||||||||| Sbjct 4518 AGCACTAGATGTAGAGTTGATTTTTTCTGGATGCTGTAGTCCGCCAAGGTGCGGCCATCC 4459 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || || || || || ||||| |||| | ||| ||||| || || || || |||||| Sbjct 4458 TCGAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGAGGGATTCCTTCTTTGTCT 4399 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGT--CCGAAGCTTCGACTTCGAGAGTGATCG 283065 || ||||| || || | | |||||||| | | ||| ||||||||| ||||| || | Sbjct 4398 TGTATCTTGGCCTTAGCATTGTCGATAGTATTGCTGAA--TTCGACTTCCAGAGTAATGG 4341 Query 283066 TCTTACCCGTCAAAGTCTTAACGAATATCT 283095 | |||| || | ||| || |||||||||| Sbjct 4340 TTTTACTGGT-AGAGTTTTCACGAATATCT 4312 >seq208872 Length=2849 Score = 95.1 bits (104), Expect = 3e-14 Identities = 87/110 (79%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 282994 TACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTT 283053 |||| |||||||| || ||||| ||||| || ||||||| || || | ||| |||| Sbjct 2339 TACCTTCCTTGTCCTGTATCTTAGCTTTAACATTATCGATGGTATCGCTGGATTCAACTT 2398 Query 283054 CGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 | || || ||||| ||||| |||| ||| || |||||||||||||||||| Sbjct 2399 CCAGCGTTATCGTTTTACCGGTCAGAGTTTTCACGAATATCTGCATTTTC 2448 >seq44843 Length=10640 Score = 93.3 bits (102), Expect = 9e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 282995 ACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTC 283054 ||| ||||||||||| ||||| || || || | || |||||||| | ||| || || Sbjct 5804 ACCTTCCTTGTCTTGAATCTTGGCCTTGACATTGTCAATAGTGTCACTGGATTCAACCTC 5863 Query 283055 GAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103 ||| || || || |||||||||||||| || ||||| |||||||||||| Sbjct 5864 GAGGGTTATGGTTTTACCCGTCAAAGTTTTCACGAAGATCTGCATTTTC 5912 >seq29975 Length=3370 Score = 91.5 bits (100), Expect = 3e-13 Identities = 137/192 (71%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || ||||| || ||||| |||||||| || | |||||| | |||||| || |||| Sbjct 2337 TCCTTTTGAATATTGTAATCAGCAAGTGTATGATCATCCTTAAATTGTTTTCCACCAAAT 2396 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 | || | |||||| || ||||| || || ||||||| ||||||||||| || | Sbjct 2397 ACTAATCTTTGTTGATCTGAGGGAATTCCTTCTTTGTCTTCAATCTTTGCTTTAACATTG 2456 Query 283029 TCGATAGTGTCCGAA-GCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 | || |||| ||| |||| || || ||||| || ||||| || | | ||| ||||| Sbjct 2457 TTAATGGTGTTGGAACTCTTC-ACATCCAGAGTAATGGTCTTTCCAATGAGAGTTTTAAC 2515 Query 283088 GAATATCTGCAT 283099 || || ||||| Sbjct 2516 AAAGATTTGCAT 2527 >seq239720 Length=7719 Score = 84.2 bits (92), Expect = 5e-11 Identities = 85/110 (77%), Gaps = 3/110 (3%) Strand=Plus/Minus Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||||||||||||||||||||||||||| || |||| || || | || ||| || Sbjct 6625 ATACCCTCCTTGTCTTGGATCTTTGCTTTCACATTATCAATGGTATATTAACTTTCTACC 6566 Query 283053 TCGAGAGTG---ATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||| || ||||| || ||||| ||||||| || |||||||| Sbjct 6565 TCCAGGGTGTGCATTGTCTTCCCGGTCAATATCTTAACAAAGATCTGCAT 6516 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1042592680043720