Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq146 113 4e-20 >seq146 Length=1436832 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 |||||||| ||| | || || ||||| ||||| || |||||| || |||| | | Sbjct 48151 ATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAGGTGGAAAGCTCC 48210 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | | ||||| ||| ||| || ||||| ||| | || |||||| Sbjct 48211 GACACCATTGACAACGTTAAGGCAAAGATTCAGGACAAAGAGGGTATCCCACCAGATCAG 48270 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTACAAT 29141 ||||| | || ||||| ||||| ||| |||||||| | || | |||||||||||| Sbjct 48271 CAAAGGTTGATTTTTGCTGGCAAGCAATTGGAAGATGGAAGGACATTAGCCGATTACAAT 48330 Query 29142 ATTCAGAAGGAATCTACTCTTCACATGGTGTT 29173 |||||||||||||| || ||||| | ||||| Sbjct 48331 ATTCAGAAGGAATCGACCCTTCATCTTGTGTT 48362 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 28954 GTGTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGG 29013 ||||| | |||||||| || ||||||| | || || || || || ||| || || Sbjct 47003 GTGTACAGATGCAAATCTTTGTCAAAACCCTCACTGGAAAGACTATCACCCTTGAGGTGG 47062 Query 29014 AACCCGCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCG 29073 || | |||| || | | | | |||| || || || || ||||| | ||| Sbjct 47063 AAAGCTCAGACACCATTGACAACGTTAAAGCCAAGATCCAGGACAAGGAAGGCATTCCCC 47122 Query 29074 TAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCG 29133 || || || || || |||||||| ||||| || || ||||| | ||| | |||| Sbjct 47123 CGGACCAGCAGAGGCTGATCTTTGCAGGCAAGCAGCTTGAAGACGGCCGTACTCTAGCCG 47182 Query 29134 ATTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 ||||||||||||||||||| || ||||| ||| ||||| | || | || || ||| Sbjct 47183 ATTACAATATTCAGAAGGAGTCAACTCTCCACTTGGTGCTCCGTCTTCGTGGTGGG 47238 Score = 86.0 bits (94), Expect = 5e-12 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 29075 AGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGA 29134 ||| || || ||||| |||||||| || ||||| || |||||| | ||| | || || Sbjct 56012 AGACCAGCAGAGACTGATCTTTGCCGGAAAACAGCTTGAAGATGGCCGTACTCTCGCTGA 56071 Query 29135 TTACAATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 29189 ||||||||| |||||||| || ||||||||| ||||| | || | || || ||| Sbjct 56072 TTACAATATCCAGAAGGAGTCCACTCTTCACTTGGTGCTCCGTCTCCGCGGTGGG 56126 Score = 86.0 bits (94), Expect = 5e-12 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 29055 GATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAACAACTGGAA 29114 ||||||||||| | || ||||| || ||||| || ||||| || |||||| ||||| Sbjct 797298 GATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGGAAACAATTGGAA 797357 Query 29115 GATTCCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTCA 29164 ||| ||| |||| |||||||| |||||||| ||||| |||||||| Sbjct 797358 GATGGTCGAACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCA 797407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428258456995370