Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq146 95.1 1e-14 >seq146 Length=1436832 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 ||||| | | ||||||||| | ||| || || ||||| || || || ||||||||| | Sbjct 48377 CCTCCCCTGAGCCTCAACACAAGATGAAGGGTCGATTCCTTCTGAATATTGTAATCGGCT 48318 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | || | |||||||||||| ||||| ||| |||| | ||| || ||||| || Sbjct 48317 AATGTCCTTCCATCTTCCAATTGCTTGCCAGCAAAAATCAACCTTTGCTGATCTGGTGGG 48258 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | || |||||||| ||| ||| || || | | ||| | ||| |||| Sbjct 48257 ATACCCTCTTTGTCCTGAATCTTTGCCTTAACGTTGTCAATGGTGTCGGAGCTTTCCACC 48198 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || | |||||| || ||||| ||||| || || || || |||||||| Sbjct 48197 TCAAGGGTAATAGTCTTGCCAGTCAAGGTCTTCACGAAGATTTGCAT 48151 Score = 93.3 bits (102), Expect = 4e-14 Identities = 109/146 (75%), Gaps = 1/146 (1%) Strand=Plus/Minus Query 19971 TTTATCATT-TTCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATG 20029 || ||||| ||||||| | | ||||| || | ||| || || |||||||| || ||| Sbjct 797443 TTGATCATGGTTCCTCCCCTGAGCCTCAGAACAAGATGAAGAGTTGATTCTTTCTGAATG 797384 Query 20030 TTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGT 20089 |||||||| ||| ||| | ||||||||||||||| || ||| |||| || ||||| Sbjct 797383 TTGTAATCAGCCAGGGTTCGACCATCTTCCAATTGTTTCCCAGCAAAAATCAGTCTCTGC 797324 Query 20090 TGATCGACGGGCACGCCTTCTTTGTC 20115 ||||| || | ||||||||| || Sbjct 797323 TGATCAGGAGGTATGCCTTCTTTATC 797298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419511240817974