Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq4 104 6e-17 >seq4 Length=4469570 Score = 104 bits (114), Expect = 6e-17 Identities = 305/468 (65%), Gaps = 3/468 (1%) Strand=Plus/Plus Query 22483 TTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTT 22542 |||||||| || | | || |||||| |||||||| |||||||| ||| || Sbjct 3868914 TTCGCGGAGCGCTTGGTGGCTTTTGCTTGTGTTGAAGGGATTTTCTTCAGCGGAAGCTTC 3868973 Query 22543 TGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAG 22602 ||| | || |||||| | |||||||| | | ||||| || |||| || ||||||||| Sbjct 3868974 TGTTCGATATTTTGGTTGAAAAAACGGGGGTTAATGCCTGGATTAACCTTCTCAAATGAG 3869033 Query 22603 TTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTATGCTATATCGGAATCAT 22662 |||||| |||| || ||| | || |||||||||||| |||| || | | | | Sbjct 3869034 TTAATTTCAAGAGACGAAGGTTTGCACTGTGATTTTGCGTGTTTGCTTTA-CAGTTTGCT 3869092 Query 22663 ATCATTCATAAACTTCCATATGAAACTGTACTTGATATTATTACAAATGCAGTTGAACTT 22722 | | || || | | || || | |||||| || |||| || || | Sbjct 3869093 A--AGGACGAAGCTAACTGAGGAGCGAGTCAGGGGAATTATTGCAGATGCTGTGGAGATA 3869150 Query 22723 GAACGTCTATTTATTTGCGAGGCGTTACCAGTAAGTCTCATTGGTATCAATGCCGAATCA 22782 ||| | || | || || || | || ||| | || || |||| || | Sbjct 3869151 GAAAGGGAGTTCGTGTGTGATGCTCTTCCTTGTGCTCTGGTGGGGATGAATGGAGATTTG 3869210 Query 22783 ATGAGTACATATATTAAATTTGTTGCAGATCGTCTATTAATTTCACTCGGTTATGCAAAG 22842 ||||||| ||| || ||||||| || ||| | | || | | | ||||||| ||| Sbjct 3869211 ATGAGTAAATACATAGAATTTGTCGCTGATAGATTGTTGGATGCTTTGGGTTATGACAAG 3869270 Query 22843 CATTATAACGTCGTTAATCCATTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACC 22902 || || | ||||||||||| |||||||| || ||| || |||| ||||| Sbjct 3869271 ATGTACAATGCTCAGAATCCATTTGATTGGATGGAGCTGATTAGCCTACAAGGGAAGACT 3869330 Query 22903 AATTTCTTCGAAAAAAGAGTTGGTGAATACCAAAAAGCAGGTGTTATG 22950 |||||||| || || |||||||| || || || || || ||||||| Sbjct 3869331 AATTTCTTTGAGAAGAGAGTTGGGGAGTATCAGAAGGCCTCTGTTATG 3869378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303105549815828