Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq146 98.7 8e-16 >seq146 Length=1436832 Score = 98.7 bits (108), Expect = 8e-16 Identities = 115/153 (75%), Gaps = 2/153 (1%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 |||||| || |||| || ||| |||||||| || ||||||||||| |||||||| || Sbjct 48378 ACCTCCCCTGAGCCTCAACACAAGATGAAGGGTCGATTCCTTCTGAATATTGTAATCGGC 48319 Query 33960 CAATTGTCGCTCG-TCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCG 34018 ||| ||| || || |||||||||||||| ||||| |||| | |||||||| | Sbjct 48318 TAAT-GTCCTTCCATCTTCCAATTGCTTGCCAGCAAAAATCAACCTTTGCTGATCTGGTG 48260 Query 34019 GCACGCTCTCTTTGTCCATAATTTTTTGCTTAA 34051 | | | |||||||||| ||| ||| ||||| Sbjct 48259 GGATACCCTCTTTGTCCTGAATCTTTGCCTTAA 48227 Score = 87.8 bits (96), Expect = 1e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| || |||| ||| || |||||||| || || ||||||||||||||||| ||| Sbjct 797431 CCTCCCCTGAGCCTCAGAACAAGATGAAGAGTTGATTCTTTCTGAATGTTGTAATCAGCC 797372 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | ||| | || |||||||| || || ||||| ||||| | ||||||||| Sbjct 797371 AGGGTTCGACCATCTTCCAATTGTTTCCCAGCAAAAATCAGTCTCTGCTGATC 797319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396990518552908