Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19]
14,854 sequences; 705,934,411 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq18 138 1e-27
seq146 123 2e-23
seq128 123 2e-23
seq8 107 2e-18
seq10 104 2e-17
seq312 98.7 1e-15
seq112 93.3 4e-14
seq104 89.7 5e-13
seq74 84.2 2e-11
>seq18
Length=3280163
Score = 138 bits (152), Expect = 1e-27
Identities = 167/226 (74%), Gaps = 1/226 (0%)
Strand=Plus/Minus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| ||||||||||| | || |||| ||| || |||||||| || || | |||||| |
Sbjct 1292961 CTTAGCACTAGATGTAGAGTTGATTTTTTCTGGATGTTGTAGTCCGCCAAGGTGCGGCCA 1292902
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
|| ||||||||||| || ||| |||| |||| |||||||| ||||| |||||||||||
Sbjct 1292901 TCCTCAAGCTGCTTACCAGCAAAAATCAGCCTTTGCTGGTCTGGAGGGATTCCTTCTTTG 1292842
Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408
|||||||| || ||| || | | ||||| | | || ||||| | || | |
Sbjct 1292841 TCTTGTATCTTGGCCTTAGCATTGTTGATAGTATCGCTGAATTCAACTTCCAGTGTAATG 1292782
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTTAATAATGA 64454
|| || ||||||| |||||| |||| || |||||||| | ||||
Sbjct 1292781 GT-TTACCGGTCAGAGTTTTCACGAGTATCTGCATTTTCACGATGA 1292737
>seq146
Length=1436832
Score = 123 bits (136), Expect = 2e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || ||||| || || ||||||||||| || | ||| || ||||
Sbjct 47678 AGCACCAAGTGAAGGGTTGATTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGGCCGTCC 47619
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||||||| | || ||| |||||||| || ||||| ||||| || ||
Sbjct 47618 TCAAGCTGCTTGCCGGCAAAGATCGGCCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 47559
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| ||| || | || || | || || || | || | ||||
Sbjct 47558 TGGATCTTAGCCTTAACATTGTCAATGGTGTCGGAGCTTTCAACCTCAAGGGTGATGGTC 47499
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| || |||||||| || |||||||||||||||
Sbjct 47498 TTTCCTGTCAAAGTCTTCACGAAAATTTGCATT 47466
Score = 118 bits (130), Expect = 1e-21
Identities = 103/128 (80%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | |||| || || |||||||||||||||||||| |||| ||| || |||||
Sbjct 47450 AGCACCAAGTGAAGAGTGGACTCTTTTTGAATGTTGTAATCAGCGAGGGTCCGGCCGTCT 47391
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||| |||||||||||| | || |||| |||||||| || ||||| ||||| || ||
Sbjct 47390 TCAAGTTGCTTGCCGGCAAAGATCAGCCTTTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 47331
Query 64352 TGTATTTT 64359
|| |||||
Sbjct 47330 TGGATTTT 47323
Score = 114 bits (126), Expect = 1e-20
Identities = 147/203 (72%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300
|||| || || || || || ||||||||||| || | ||| || |||| |||||||||
Sbjct 48125 TGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCAAGGGTCCGGCCGTCCTCAAGCTGC 48066
Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360
|| |||||| | || | || ||||||||| || ||||| |||||||| || || |||||
Sbjct 48065 TTTCCGGCAAAGATCAACCTCTGCTGGTCTGGTGGAATACCTTCTTTGTCCTGAATTTTG 48006
Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420
||| ||| || | || ||| ||||| || | || | |||||||| |||
Sbjct 48005 GCCTTAACATTGTCAATGGTGTCAGAACTTTCCACCTCAAGGGTAATAGTCTTGCCAGTC 47946
Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443
|| || || || || ||||||||
Sbjct 47945 AAGGTCTTCACAAAGATTTGCAT 47923
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| ||||| | | ||| || | |||| || || || || || ||||||||||| ||
Sbjct 47921 CCACCGCGAAGACGAAGGACCAAGTGAAGGGTTGACTCCTTCTGGATGTTGTAATCAGCA 47862
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| ||| || | || ||||||||||| |||||| | || | | |||||||| || |||
Sbjct 47861 AGGGTCCGGCCATCCTCAAGCTGCTTTCCGGCAAAGATCAATCTTTGCTGGTCTGGGGGA 47802
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| ||||| || || || | | || ||||| || || | || || | || ||
Sbjct 47801 ATGCCTTCCTTGTCCTGGA-TCTTGGCTTTAACGTTGTCAATAGTGTCGGAGCTTTCAAC 47743
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|| | || | |||||| ||||||||||| || |||||||||||||||
Sbjct 47742 CTCAAGGGTGATGGTCTTTCCGGTCAAAGTCTTCACGAAAATTTGCATT 47694
Score = 95.1 bits (104), Expect = 1e-14
Identities = 139/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || ||||| |||||||| || || | || | | |||||||||||||| ||
Sbjct 48575 GTAGACTCCTTTTGGATGTTGTAGTCCGCCAGAGTCCTTCCATCTTCAAGCTGCTTCCCT 48516
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| ||||||||| || || ||||| || || || || || || |||
Sbjct 48515 GCAAAGATCAGCCTCTGCTGGTCCGGTGGGATTCCCTCCTTGTCCTGAATCTTAGCCTTC 48456
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | |||||| ||||| || | ||| | ||| || || ||||| ||
Sbjct 48455 ACATTGTCAATGGTATCAGAACTCTCCACCTCCAAAGTGATGGTTTTCCCAGTCAAGGTC 48396
Query 64427 TTTACGAAAATTTGCAT 64443
|| || ||||| |||||
Sbjct 48395 TTCACAAAAATCTGCAT 48379
Score = 93.3 bits (102), Expect = 4e-14
Identities = 94/121 (78%), Gaps = 1/121 (1%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || ||||| |||||||| || | || || |||||||||||||||||||
Sbjct 47207 GTTGACTCCTTCTGAATATTGTAATCGGCTAGAGTACGGCCGTCTTCAAGCTGCTTGCCT 47148
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| ||||||||| || ||||| ||||| || || || | | || |||||
Sbjct 47147 GCAAAGATCAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGA-TCTTGGCTTT 47089
Query 64367 A 64367
|
Sbjct 47088 A 47088
Score = 91.5 bits (100), Expect = 1e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| || || ||||||| || |||||||| |||||||||||||| || | ||| || |
Sbjct 797419 CTCAGAACAAGATGAAGAGTTGATTCTTTCTGAATGTTGTAATCAGCCAGGGTTCGACCA 797360
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
||||| | || || || ||| |||| || | |||||| || ||||| || ||||||||
Sbjct 797359 TCTTCCAATTGTTTCCCAGCAAAAATCAGTCTCTGCTGATCAGGAGGTATGCCTTCTTTA 797300
Query 64349 TCTTG 64353
|| ||
Sbjct 797299 TCCTG 797295
>seq128
Length=1543362
Score = 123 bits (136), Expect = 2e-23
Identities = 158/215 (73%), Gaps = 2/215 (1%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || |||| || || || ||||| ||||||||||| || | || || | ||
Sbjct 1025908 AAGGACAAGGTGAAGAGTGGACTCCTTTTGGATGTTGTAATCAGCAAGTGTTCGGCCATC 1025967
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||||||| || || ||| | || |||| ||||||||| || ||||| ||||| || ||
Sbjct 1025968 TTCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATACCTTCCTTGTC 1026027
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
||| | |||| ||||| ||| || | || || | || || || | ||||| |
Sbjct 1026028 TTG-AATTTTAGCTTTGACATTATCAATGGTGTCTGAGCTCTCGACCTCAAGAGTTATAG 1026086
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCATT 64444
|||| ||||||| |||||| || || |||||||||
Sbjct 1026087 TCTTTCCGGTCAGAGTTTTAACAAAGATTTGCATT 1026121
Score = 104 bits (114), Expect = 2e-17
Identities = 153/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || |||||||| ||||||||||||||||| | ||| | | ||
Sbjct 1025224 AAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCTGCCAAGGTCCTTCCATC 1025283
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||| ||||| || ||| | || | | ||||||||| || ||||| || || || ||
Sbjct 1025284 CTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGGGGAATACCCTCCTTGTC 1025343
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
||| | | |||||||| || || | ||||| || || || | ||| | |
Sbjct 1025344 TTG-AATCTTTGCTTTGACGTTGTCAATGGTATCTGAACTCTCAACCTCCAAAGTAATTG 1025402
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || |||||||| || || |||||||||||
Sbjct 1025403 TCTTCCCCGTCAAAGTCTTGACAAAAATTTGCAT 1025436
Score = 100 bits (110), Expect = 3e-16
Identities = 152/214 (71%), Gaps = 2/214 (1%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || |||||||| |||||||||||||| || | ||| | | ||
Sbjct 1025452 AAGAACAAGGTGCAGGGTTGATTCTTTCTGAATGTTGTAATCCGCCAAGGTCCTTCCATC 1025511
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||| ||||| || ||| | || | | ||||||||| |||||||| || || || ||
Sbjct 1025512 CTCAAGTTGCTTTCCAGCAAAGATCAATCTCTGCTGGTCTGGAGGAATACCCTCCTTGTC 1025571
Query 64351 TTGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409
||| | | |||||||| ||| || | ||||| || || || | ||| | |
Sbjct 1025572 TTGGA-TCTTTGCTTTAACATTGTCGATAGTATCTGAACTCTCAACCTCCAAAGTAATTG 1025630
Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|||| || ||||| || || || || ||||||||
Sbjct 1025631 TCTTCCCTGTCAATGTCTTAACAAATATTTGCAT 1025664
Score = 96.9 bits (106), Expect = 3e-15
Identities = 149/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || ||||| | || || ||||| ||||| ||||| || || | ||| | | ||
Sbjct 1025680 AAGAACAAGATGTAAGGTAGACTCTTTCTGAATATTGTAGTCAGCCAGGGTCCTTCCATC 1025739
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
||||| |||||||||||| | || || | ||||||||| |||||||| ||||| || ||
Sbjct 1025740 CTCAAGTTGCTTGCCGGCAAAGATCAGTCTCTGCTGGTCTGGAGGAATCCCTTCCTTATC 1025799
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| ||||| ||| || || | |||||| || ||||| | || | |||
Sbjct 1025800 CTGAATTTTGGCCTTCACGTTGTCAATTGTATCTGAACTTTCAACTTCAAGGGTGATGGT 1025859
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| || || | || || || || || |||||
Sbjct 1025860 CTTTCCAGTAAGTGTCTTGACAAAGATCTGCAT 1025892
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
|| || ||||| | || || |||||||| || |||||||| || | || || | |||
Sbjct 1026137 AGGACAAGATGGAGGGTAGACTCTTTTTGGATATTGTAATCAGCAAGTGTTCGGCCATCT 1026196
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||| || || ||| | || |||| ||| || || |||||||| ||||| || |||
Sbjct 1026197 TCAAGCTGTTTCCCAGCAAAGATCAGCCTCTGTTGATCTGGAGGAATGCCTTCCTTGTCT 1026256
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||||| ||| || | || ||| || || || | ||| | |||
Sbjct 1026257 TG-AATCTTAGCTTTGACATTATCAATGGTGTCAGAACTCTCGACCTCAAGAGTGATGGT 1026315
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||| ||||| | || || || || || |||||
Sbjct 1026316 CTTTCCGGTGAGTGTCTTAACAAAGATCTGCAT 1026348
>seq8
Length=4063183
Score = 107 bits (118), Expect = 2e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | ||| | || ||||| |||||||||||||||||||| | || | | ||
Sbjct 1949185 AGCACCAAATGGAGAGTTGATTCCTTTTGAATGTTGTAATCTGCTAGAGTCCTTCCATCC 1949126
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||| || || ||| |||| | || ||||||||| || || || ||||| || |||
Sbjct 1949125 TCAAGCTGTTTCCCAGCAAAAATCAACCTCTGCTGGTCAGGTGGGATGCCTTCCTTATCT 1949066
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| ||||| ||| ||| || | || ||| || || || | || | ||||
Sbjct 1949065 TGAATTTTAGCCTTGACATTGTCGATGGTGTCAGAACTCTCAACCTCAAGGGTGATGGTC 1949006
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || ||||| || || || ||||| |||||
Sbjct 1949005 TTCCCTGTCAATGTCTTCACAAAAATCTGCAT 1948974
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| || ||||| | ||| || || || | || || || || || ||||| || |||||
Sbjct 1948288 ACCACCACGCAAACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTATAGTCTGC 1948229
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
| || | |||| || | ||||| || ||| | || |||| ||||| || |||||
Sbjct 1948228 AAGAGTTCTACCGTCCTCTAATTGCTTTCCAGCAAAGATCAGCCTTTGCTGATCAGGAGG 1948169
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
||||||||| || ||||| || ||| ||| ||| || | ||| ||| || ||
Sbjct 1948168 AATTCCTTCCTTGTCTTGAATCTTTGCCTTAACATTATCGATTGTGTCAGAACTCTCAAC 1948109
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||||| ||||||||| || | || || || || ||||||||
Sbjct 1948108 CTCGAGAGTTATGGTCTTGCCAGTAAGGGTCTTAACAAAGATTTGCAT 1948061
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | ||| | || || ||||| || || |||||||| || | || | | ||
Sbjct 1949413 AGCACCAAATGGAGTGTGGACTCTTTCTGGATATTGTAATCAGCAAGAGTCCTACCATCC 1949354
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|||||||||||||| ||| |||| | ||||||||||| || ||||| |||||||| |||
Sbjct 1949353 TCAAGCTGCTTGCCAGCAAAAATTAAACGCTGCTGGTCTGGTGGAATCCCTTCTTTGTCT 1949294
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || ||| ||| ||| || | || || || || || | || | |||
Sbjct 1949293 TGGATCTTTGCCTTCACATTATCAATGGTGTCTGAACTTTCTACCTCCAGGGTGATTGTC 1949234
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| || ||||| || || || ||||| |||||
Sbjct 1949233 TTCCCAGTCAATGTCTTCACAAAAATCTGCAT 1949202
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276
|| || |||| | ||| || || || | || || || ||||| |||||||| || ||
Sbjct 1948744 CCACCACGCAGACGAAGGACAAGGTGGAGTGTGGACTCCTTTTGGATGTTGTAGTCAGCT 1948685
Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336
| || | | || || | ||| || |||||| | || | | |||||| || ||||||
Sbjct 1948684 AGAGTTCTTCCATCCTCCAACTGTTTACCGGCAAAGATCAATCTCTGCTGATCTGGAGGA 1948625
Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396
|||||||| || ||||| |||||| ||| ||| || | || ||| | || ||
Sbjct 1948624 ATTCCTTCCTTATCTTGGATTTTTGCCTTGACATTGTCAATAGTGTCAGAGCTCTCAACC 1948565
Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| | ||| | ||||| || ||||| ||||| || || || |||||
Sbjct 1948564 TCAAGAGTAATTGTCTTCCCAGTCAAGGTTTTCACAAAGATCTGCAT 1948518
>seq10
Length=3946082
Score = 104 bits (114), Expect = 2e-17
Identities = 141/194 (73%), Gaps = 2/194 (1%)
Strand=Plus/Minus
Query 64254 CTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAA 64313
|||| |||||||||||||| || | || || | ||||| |||||||| ||||| | |
Sbjct 3853637 CTTTCTGAATGTTGTAATCAGCTAGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAGA 3853578
Query 64314 TGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT-ACAACC 64372
| | ||||||||||| || ||||| ||||| || ||||| | | || ||||| |||
Sbjct 3853577 TCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTG-AATCTTAGCTTTGACATTG 3853519
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | || || | | || ||||| | || | ||||| || || | |||||| |||
Sbjct 3853518 TCAATAGTGTCGCTCGATTCAACTTCGAGTGTGATCGTCTTCCCCGTAAGAGTTTTCACG 3853459
Query 64433 AAAATTTGCATTTT 64446
|| || ||||||||
Sbjct 3853458 AAGATCTGCATTTT 3853445
>seq312
Length=758973
Score = 98.7 bits (108), Expect = 1e-15
Identities = 149/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| | ||| | || || || || || ||||||||||| || | || || ||||
Sbjct 43015 AGCACCAAATGGAGGGTAGACTCCTTCTGGATGTTGTAATCAGCTAGAGTACGTCCGTCC 43074
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
|| | |||||| ||||| | || |||| ||||| || || ||||||||||| || ||
Sbjct 43075 TCCAACTGCTTTCCGGCGAAGATAAGCCTTTGCTGATCCGGGGGAATTCCTTCCTTATCC 43134
Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411
|| || || ||| || || | ||||||| ||||| |||| || | ||||
Sbjct 43135 TGAATCTTAGCCTTAACGTTGTCGATTGTATCAGAACTTTCCACCTCTAGGGTGATGGTC 43194
Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
|| ||||| | |||||| || || || |||||
Sbjct 43195 TTTCCGGTGAGAGTTTTCACAAAGATCTGCAT 43226
Score = 86.0 bits (94), Expect = 6e-12
Identities = 148/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| ||||| | |||| || || || || ||||||||||| || || | |||||| |
Sbjct 42100 CTCAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCCGCAAGGGTGCGGCCA 42159
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
|| |||||||| || || || | || | || ||||||||| || ||||| || || ||
Sbjct 42160 TCCTCAAGCTGTTTACCAGCGAAGATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTG 42219
Query 64349 TCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACG 64408
||||| || || ||| ||| || | || || | || || || | || | |
Sbjct 42220 TCTTGGATCTTGGCCTTAACATTGTCAATGGTGTCGGAGCTCTCAACCTCCAGGGTGATG 42279
Query 64409 GTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443
||||| ||||| | || || || ||||| |||||
Sbjct 42280 GTCTTCCCGGTAAGGGTCTTAACAAAAATCTGCAT 42314
Score = 82.4 bits (90), Expect = 8e-11
Identities = 139/199 (70%), Gaps = 2/199 (1%)
Strand=Plus/Plus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || || ||||| || || | |||||| | |||||||||||||| ||
Sbjct 41890 GTGGACTCCTTCTGGATATTGTAGTCGGCAAGGGTGCGTCCATCTTCAAGCTGCTTACCA 41949
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || | || ||||||||| || || || || || || || || | | || |||||
Sbjct 41950 GCAAAGATCAACCTCTGCTGGTCTGGTGGGATCCCCTCCTTGTCCTG-AATCTTAGCTTT 42008
Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425
||| || | || ||| ||||| || | || | |||||| ||||| || ||
Sbjct 42009 CACATTGTCGATGGTGTCAGAACTCTCCACCTCCAAGGTGATGGTCTTCCCGGTTAAGGT 42068
Query 64426 TTTTACGAAAATTTGCATT 64444
|| || || || ||||||
Sbjct 42069 CTTCACAAAGATCTGCATT 42087
>seq112
Length=1653863
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290
||| || || || | || || || || || |||||||| || || | || || | ||
Sbjct 815018 AAGGACAAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGCTAGTGTTCGTCCATC 814959
Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350
|| |||||||| ||||| |||| | ||||||||||| || ||||| ||||| || ||
Sbjct 814958 CTCGAGCTGCTTACCGGCGAAAATCAATCGCTGCTGGTCTGGTGGAATGCCTTCCTTGTC 814899
Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
||| || || ||| ||| || | || || | || || |||| || | ||
Sbjct 814898 TTGAATCTTAGCCTTAACATTGTCAATGGTGTCCGATGACTCTACCTCTAAGGTAATAGT 814839
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
|||||| |||| || ||||| || || ||||||||
Sbjct 814838 CTTGCCCGTCAGGGTCTTTACAAAGATCTGCATTTT 814803
>seq104
Length=1719749
Score = 89.7 bits (98), Expect = 5e-13
Identities = 151/216 (70%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291
||||| ||||| | || || || || || |||||||| || || | || || | ||
Sbjct 292598 AGCACGAGATGGAGAGTTGACTCCTTCTGGATGTTGTAGTCGGCAAGAGTACGACCATCC 292539
Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351
||||||||||| ||||| |||| | ||||||||||| || ||||| ||||| || ||
Sbjct 292538 TCAAGCTGCTTTCCGGCGAAAATCAAACGCTGCTGGTCTGGGGGAATCCCTTCCTTGTCC 292479
Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410
|| | | || ||||| ||| || | || || | || || |||| || | ||
Sbjct 292478 TGGA-TCTTGGCTTTGACATTGTCGATGGTGTCGGAAGACTCAACCTCTAGGGTGATCGT 292420
Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446
||| || || | ||||| ||||| || ||||| ||
Sbjct 292419 CTTCCCCGTTAGGGTTTTCACGAAGATCTGCATCTT 292384
>seq74
Length=2020511
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 64229 CTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG 64288
|| ||||| | |||| || || || || ||||||||||| || || | ||||| |
Sbjct 552995 CTCAGCACCAAGTGAAGGGTAGACTCCTTCTGAATGTTGTAGTCAGCCAGAGTGCGGCCA 553054
Query 64289 TCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTT 64348
|| || ||||||||||| || |||| | || ||||||||| || ||||| || || ||
Sbjct 553055 TCCTCGAGCTGCTTGCCTACAAAAATCAACCTCTGCTGGTCTGGGGGAATACCCTCCTTG 553114
Query 64349 TCTTGTATTTT 64359
||||| || ||
Sbjct 553115 TCTTGGATCTT 553125
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499552028451760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |