Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq102 136 5e-27 seq32 107 2e-18 >seq102 Length=1742045 Score = 136 bits (150), Expect = 5e-27 Identities = 311/456 (68%), Gaps = 18/456 (4%) Strand=Plus/Plus Query 15887 ATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCGGC 15946 |||||| || ||||| | || | || ||||| ||||| | ||||| ||||| || Sbjct 801201 ATCAAATCGTCCTGGCCTCAGCAAAGCAGAGTCAAGAATATCTGCACGATTGGTTGCCGC 801260 Query 15947 GATGACAACAATACCTGT--TTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004 | || | ||||| || ||| || | ||||||||||| || ||||| || ||||| Sbjct 801261 AACAACTATTATACCAGTATTTCCTT--CGAAACCATCCATTTCAGTCAATAGTTGGTTC 801318 Query 16005 ATAGTTTGTTCCCGTTCATCATTCGCTGGCATACCA--CCAGCACTGCGTTGCTTTCCCA 16062 | || ||||||| ||||||||| || | | | | |||| | | |||| || | Sbjct 801319 AGGGTCTGTTCCCTTTCATCATTTCCT--CCTCCAATTCCAGTCCCTCTTTGCCGCCCAA 801376 Query 16063 CGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTT-CGCGAGCGACTTCAAAG 16121 | |||||||| ||||||| || || ||||| || ||||| | | | ||| ||| Sbjct 801377 CAGCATCAATTTCATCAACAAATACAATGCAAGGAGCATTTTCCTTGGCCTTCTTGAAA- 801435 Query 16122 AGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAA 16181 ||||| || || || ||| || ||||||||||||||||| || || | || | | ||| Sbjct 801436 AGATCACGGACTCGAGAGGCTCCAACACCAACAAACATCTCAACGAATTCTGAGCCTGAA 801495 Query 16182 CATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACC 16240 |||| || || || ||| | |||||| ||||| || || || | || || || Sbjct 801496 -ATTGAGAAAAATGGAACACCTGCTTCACCAGCAATTGCCTTTGCTAGCAAGGTTTTCCC 801554 Query 16241 CGTACCTGGCTTACCCGCGAGGAGGGCACCTCGTGGAAT-CTTGGCGCCACTTCCAAAGT 16299 ||||| || ||| | || || ||||| |||||| | | | ||||| | ||| Sbjct 801555 AGTACCAGGAGGACCAACAAGAAGAACACCTTTTGGAATACGAGCCCCCACTGC---AGT 801611 Query 16300 --ATCTCTCAGGTTGCTTAAGAAAATCCACAATCTC 16333 |||||||||||| ||| | ||| || || | ||| Sbjct 801612 AAATCTCTCAGGTTTCTTCAAAAATTCTACGACCTC 801647 >seq32 Length=2710826 Score = 107 bits (118), Expect = 2e-18 Identities = 198/287 (69%), Gaps = 24/287 (8%) Strand=Plus/Minus Query 15975 AAACCATCCATCTCTGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATTCGCTGGC 16034 || |||||||| || ||||||||||| |||||||| || || | |||||||| | Sbjct 1990071 AACCCATCCATTTCAGTCAAAAGCTGATTAATAGTCTGCTCTCTCTCATCATTTCC---- 1990016 Query 16035 ATACCACCA------GCACTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACG 16088 ||||||| |||| | || ||||||| ||||||||||||||||| || || Sbjct 1990015 --ACCACCAAGTCCTGCACCTCTCTGTCTTCCCACAGCATCAATCTCATCAATAAACACA 1989958 Query 16089 ATGCATGG----TTGATTTTCGCGAGCGACTTCAAAGAGATCCCGTACACGCTTG--GCG 16142 || || || || |||||| | ||||| | ||||| || || || | || Sbjct 1989957 ATACAAGGCGCTTTAGATTTCGCCTTC----TCAAACAAATCCC-TA-ACTCTAGAAGCT 1989904 Query 16143 CCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGAACATTGGATGAAGGGGACATTA 16202 |||||||| ||||||| ||| ||||| | || || | ||| || || || ||| | Sbjct 1989903 CCCACACCCACAAACAACTCAACAAACTCTGATGCTGCACAAGAGAAAAATGGCACACCA 1989844 Query 16203 GATTCACCCGCAATGGCTCGGGCGAGAAGAGTCTTACCCGTACCTGG 16249 | ||||| || | |||| || | ||| ||||| || |||||||| Sbjct 1989843 GCCTCACCAGCTACTGCTCTAGCTAAAAGGGTCTTCCCAGTACCTGG 1989797 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620627143654880