Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= NC_019945.1 Length=132978 Score E Sequences producing significant alignments: (Bits) Value seq146 89.7 4e-13 seq128 89.7 4e-13 >seq146 Length=1436832 Score = 89.7 bits (98), Expect = 4e-13 Identities = 73/89 (82%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 28668 GATCAACAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGAT 28727 ||||| |||||||| || ||||| || ||||||||||||||| | ||| |||| ||| Sbjct 797319 GATCAGCAGAGACTGATTTTTGCTGGGAAACAATTGGAAGATGGTCGAACCCTGGCTGAT 797378 Query 28728 TATAACATTCAAAAAGAATCTACTCTGCA 28756 || |||||||| |||||||| ||||| || Sbjct 797379 TACAACATTCAGAAAGAATCAACTCTTCA 797407 >seq128 Length=1543362 Score = 89.7 bits (98), Expect = 4e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 28554 ATGCAAATATTTGTAAAAACATTAACGGGTAAAACCATTACCGCCGAAACGGAACCTTCA 28613 |||||||||||||| || ||||| || || || || ||||| || || |||| Sbjct 1025664 ATGCAAATATTTGTTAAGACATTGACAGGGAAGACAATTACTTTGGAGGTTGAGAGTTCA 1025605 Query 28614 GAGACGGTGGCCGATCTCAAGCAAAAAATCGCCGACAAAGAGGGAGTGCCCGTAGATCAA 28673 || || | | | || | || ||| ||| ||||| ||||| | || ||| || Sbjct 1025604 GATACTATCGACAATGTTAAAGCAAAGATCCAAGACAAGGAGGGTATTCCTCCAGACCAG 1025545 Query 28674 CAGAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAC 28733 |||||| | |||||||| || || ||| | || ||| | || |||| ||||| ||| Sbjct 1025544 CAGAGATTGATCTTTGCTGGAAAGCAACTTGAGGATGGAAGGACCTTGGCGGATTACAAC 1025485 Query 28734 ATTCAAAAAGAATCTACTCTGCAC 28757 ||||| |||||||| || |||||| Sbjct 1025484 ATTCAGAAAGAATCAACCCTGCAC 1025461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425327787639666