Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq128 91.5 2e-13 seq146 84.2 3e-11 >seq128 Length=1543362 Score = 91.5 bits (100), Expect = 2e-13 Identities = 142/203 (70%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || || | || ||| | || ||||| || || ||| |||| || || | | Sbjct 1026347 TGCAGATCTTTGTTAAGACACTCACCGGAAAGACCATCACTCTTGAGGTCGAGAGTTCTG 1026288 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| | ||||| ||| ||| || ||| || ||||||||||| || ||||||| Sbjct 1026287 ACACCATTGATAATGTCAAAGCTAAGATTCAAGACAAGGAAGGCATTCCTCCAGATCAAC 1026228 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | || || || ||||| || ||||| | || ||| |||| | | ||||| |||| Sbjct 1026227 AGAGGCTGATCTTTGCTGGGAAACAGCTTGAAGATGGCCGAACACTTGCTGATTACAATA 1026168 Query 146212 TACAAAAAGAATCGACTATCCAT 146234 | |||||||| || || ||||| Sbjct 1026167 TCCAAAAAGAGTCTACCCTCCAT 1026145 >seq146 Length=1436832 Score = 84.2 bits (92), Expect = 3e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 146126 TAAAGAAGGCATTCCACCCGATCAACAAAGACTCATTTTTGCAGGTAAACAATTAGATGA 146185 |||||||||||| || || ||||| || ||||| |||||||| || |||||||| || || Sbjct 797300 TAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGGAAACAATTGGAAGA 797359 Query 146186 TAATAGAACGTTAACAGATTATAATATACAAAAAGAATCGACTATCCAT 146234 | | |||| | | ||||| || || || |||||||| ||| | ||| Sbjct 797360 TGGTCGAACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCAT 797408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786020428553680