Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq14854 93.3 2e-14 seq520 80.6 1e-10 >seq14854 Length=155296 Score = 93.3 bits (102), Expect = 2e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 50110 GTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAA 50169 ||||||||| | ||||||||||||| | |||| ||| ||||||||| |||||||||| || Sbjct 37588 GTTGCGGAGACAGGATTTGAACCCGTGACCTCAAGGTTATGAGCCTTGCGAGCTACCAAA 37647 Query 50170 CTGCTCTACTCCGC 50183 ||||||||| |||| Sbjct 37648 CTGCTCTACCCCGC 37661 >seq520 Length=350176 Score = 80.6 bits (88), Expect = 1e-10 Identities = 64/76 (84%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 50111 TTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCGAAC 50170 |||||||| | ||||||||| || | |||| ||| ||||||||| |||||||||| ||| Sbjct 45324 TTGCGGAGACATGATTTGAACTCGTGACCTCAAGGTTATGAGCCTAGCGAGCTACCAAAC 45265 Query 50171 TGCTCTACTCCGCATT 50186 |||||||| ||| ||| Sbjct 45264 TGCTCTAC-CCGAATT 45250 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181571166784548