Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq10 89.7 5e-13 seq128 84.2 2e-11 >seq10 Length=3946082 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/191 (71%), Gaps = 2/191 (1%) Strand=Plus/Minus Query 131934 CTTTTTGAATGTTGTAGTC-GCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAATAG 131992 |||| ||||||||||| || ||| | ||||| |||||||||||| || |||| || Sbjct 3853637 CTTTCTGAATGTTGTAATCAGCT-AGAGTACGTCCATCTTCGAGCTGCTTTCCGGCGAAG 3853579 Query 131993 ATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAACTGT 132052 || | ||||| || || || || || ||||| || || ||| || ||| | | Sbjct 3853578 ATCAATCGCTGCTGGTCCGGTGGAATACCTTCCTTGTCTTGAATCTTAGCTTTGACATTG 3853519 Query 132053 TCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTATG 132112 || | ||| ||| ||| || ||||||| || | ||| || || || |||||||| | | Sbjct 3853518 TCAATAGTGTCGCTCGATTCAACTTCGAGTGTGATCGTCTTCCCCGTAAGAGTTTTCACG 3853459 Query 132113 AAAATCTGCAT 132123 || |||||||| Sbjct 3853458 AAGATCTGCAT 3853448 >seq128 Length=1543362 Score = 84.2 bits (92), Expect = 2e-11 Identities = 135/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || || |||||||| | ||| || ||| || |||||||| || | | Sbjct 1024787 GACTCTTTCTGGATATTGTAGTCTGCAAGGGTGCGGCCATCCTCCAGCTGTTTGCCAGCA 1024846 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || | |||||||||||| || || ||||| || || || ||| ||||| Sbjct 1024847 AAGATGAGCCTCTGTTGATCTGGTGGAATCCCTTCCTTGTCCTGTATCTTTGCTTTCACA 1024906 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | ||| || | |||||| || | || | || || ||||||||||| || Sbjct 1024907 TTGTCAATAGTGTCAGAGCTCTCCACCTCCAATGTGATTGTCTTCCCAGTCAGAGTCTTC 1024966 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 1024967 ACAAAGATCTGCAT 1024980 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476522705215440