Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq146 95.1 1e-14 >seq146 Length=1436832 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 |||||| | || || || || || || || || | || || | || || ||| | | Sbjct 48151 ATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAGGTGGAAAGCTCC 48210 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || || || | || || ||| ||| || ||||||||||| || || |||||| Sbjct 48211 GACACCATTGACAACGTTAAGGCAAAGATTCAGGACAAAGAGGGTATCCCACCAGATCAG 48270 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| | |||| | ||||| ||| | ||||||| || | | |||||||||| Sbjct 48271 CAAAGGTTGATTTTTGCTGGCAAGCAATTGGAAGATGGAAGGACATTAGCCGATTACAAT 48330 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| || ||||| ||| ||||| | ||||| || | || ||||| Sbjct 48331 ATTCAGAAGGAATCGACCCTTCATCTTGTGTTGAGGCTCAGGGGAGG 48377 Score = 86.0 bits (94), Expect = 6e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 25175 ATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAAC 25234 ||||| || ||||| ||||| || || || || | || || | || || || | | Sbjct 56355 ATGCAGGTCTTTGTCAAAACCTTGACTGGCAAGACTATTACACTTGAGGTTGAGAGCTCC 56414 Query 25235 GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCAG 25294 || || ||||| | || || || ||| || |||||||| || || || || ||| Sbjct 56415 GACACCATCGACAATGTTAAGGCCAAGATTCAGGACAAAGAGGGCATCCCTCCAGACCAG 56474 Query 25295 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAAT 25354 ||||| | |||| | || || || | ||||||| || | | |||||||||| Sbjct 56475 CAAAGGTTGATTTTTGCTGGTAAGCAGTTGGAAGATGGAAGGACATTAGCCGATTACAAT 56534 Query 25355 ATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 ||||| || ||||| ||| ||||| | ||||| ||| | || ||||| Sbjct 56535 ATTCAGAAGGAATCGACCCTTCATCTTGTGTTGAGACTCAGGGGAGG 56581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445011757097280