Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq146 98.7 8e-16 >seq146 Length=1436832 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| || || || || |||||||||||||| |||||| | || ||| | | Sbjct 48151 ATGCAAATCTTCGTGAAGACCTTGACTGGCAAGACTATTACCCTTGAGGTGGAAAGCTCC 48210 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | | || || ||| ||| |||||||| || | || ||||| Sbjct 48211 GACACCATTGACAACGTTAAGGCAAAGATTCAGGACAAAGAGGGTATCCCACCAGATCAG 48270 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 |||||| | |||| ||| ||||| ||||| |||||| | || | | ||||||||| Sbjct 48271 CAAAGGTTGATTTTTGCTGGCAAGCAATTGGAAGATGGAAGGACATTAGCCGATTACAAT 48330 Query 106440 ATACAAAAAGAATCTACACTACATTTAGTATTGAGGTTACGAGGAGG 106486 || || || ||||| || || ||| | || |||||| | | ||||| Sbjct 48331 ATTCAGAAGGAATCGACCCTTCATCTTGTGTTGAGGCTCAGGGGAGG 48377 Score = 86.0 bits (94), Expect = 5e-12 Identities = 100/135 (74%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 106353 GACAAAGAAGGCGTGCCCGTTGATCAACAAAGGCTTATTTATGCGGGCAAACAATTAGAA 106412 || ||||||||| | || |||||| || || || |||| ||| || |||||||| ||| Sbjct 797298 GATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGGAAACAATTGGAA 797357 Query 106413 GATTCTAAAACTATGGGCGATTACAACATACAAAAAGAATCTACACTACATTTAGTATTG 106472 ||| | ||| ||| ||||||||||| || |||||||| || || ||| | || || Sbjct 797358 GATGGTCGAACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCATCTTGTTCTG 797417 Query 106473 AGGTTACGAGGAGGA 106487 ||| | | |||||| Sbjct 797418 AGGCTCAGGGGAGGA 797432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 402256765015232