Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq20 93.3 5e-14 >seq20 Length=3188724 Score = 93.3 bits (102), Expect = 5e-14 Identities = 210/314 (67%), Gaps = 14/314 (4%) Strand=Plus/Minus Query 11924 GAATTACCGAGAATCCTATGGTCTCTTTGCGTGCTCTGGTATTCTCTTCAACCACGAGTC 11983 ||||||||| ||| | || || | || |||||| ||| |||||||||||||||||||| Sbjct 1119585 GAATTACCGCGAAGCGTACGGGATATTCGCGTGCAATGGGATTCTCTTCAACCACGAGTC 1119526 Query 11984 ACCCCGTCGTGGCCCGGATTTCGTGACAAAGAAGATCACC------GATGGTATCAAACA 12037 || ||||| || |||||||||| | |||||| ||| | || | | | | Sbjct 1119525 TCCTCGTCGGGGTGAAAATTTCGTGACGAGGAAGATAACCCGGGCTGTAGGGAGGATAAA 1119466 Query 12038 AATCGTGGCGGGT-GAGAGGGAGTTCATTGAATTGGGGAACCTCAACGCCGAGAGGGACT 12096 ||||| || | |||| || | || |||||||| | | || ||||||| Sbjct 1119465 AATCG----GGTTACAGAGCAAGGTGTTT---TTGGGGAATTTACAGGCGTCAAGGGACT 1119413 Query 12097 GGGGACATGCCAAGGACTATGTTGAAGCCATGTGGCTCGTACTTCAACAAGAAGAGGCGG 12156 |||| ||| |||||||| ||||| |||||| | | || || ||||| | | | Sbjct 1119412 GGGGCTTTGCTGGAGACTATGTAGAAGCAATGTGGATGATGCTGCAGCAAGAGAAACCAG 1119353 Query 12157 ACGAATATGTCGTCGCGACGGGGGAGACACACTCCGTCAGGGAGTTCGTTGAGTTGTGCT 12216 |||| || || || || |||| ||| |||| | || |||||| | || | | Sbjct 1119352 ACGACTACGTTGTGGCAACGGAGGATTCACATACTGTAGAGGAGTTTCTAGAAGTAGCAT 1119293 Query 12217 TTAGGGAAGTTGGA 12230 ||||| | |||||| Sbjct 1119292 TTAGGTACGTTGGA 1119279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618320372044240