Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Solanum_20tuberosum_20[refseq_20GCF_5F000226075.1_202011-09-19] 14,854 sequences; 705,934,411 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq84 100 4e-16 seq242 96.9 5e-15 >seq84 Length=1873685 Score = 100 bits (110), Expect = 4e-16 Identities = 158/224 (71%), Gaps = 2/224 (1%) Strand=Plus/Plus Query 78158 ACCTCCCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACC 78217 |||||| || || | ||||| || |||| |||| | || | | ||| |||| ||| || Sbjct 702149 ACCTCCTTGGTCAACATATCGAGCAGTGTCATTAAACACACGTAGCATCGGAACAATTCC 702208 Query 78218 GTTAGATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGA 78277 ||| ||||| |||||||||||| ||||||||| ||| || | |||||||| | || Sbjct 702209 GTTTGATGTCCCATTTGTTCCACGAATATAACTCCCAGTTCCACGAATATTGTGCACAGA 702268 Query 78278 TATCCCTATTCCTCCTGCCATCTTAGAT-ATTAGAGCGCAACGTTTCAATGTATCGTAGA 78336 || || |||||||| | || || | | || | ||| || || | || || || | Sbjct 702269 TACTCCAATTCCTCCAG-CAGATTTGCTAATAACAGCACACTCCTTAAGAGTGTCATATA 702327 Query 78337 TACCCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTA 78380 | ||||| ||||| ||||| ||||| | || || |||||| Sbjct 702328 TGCCCTCAATACTATCATCTTTCATGCATATCAGGAAGCAGCTA 702371 >seq242 Length=1004679 Score = 96.9 bits (106), Expect = 5e-15 Identities = 158/228 (69%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 78398 AGTTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATT 78457 ||| || |||||||||| ||| ||||||||||| || ||||| || ||| | | | Sbjct 787667 AGTGCCAGCATTAAATAGTGTTGGAGATGCATGAGTGAACCAGCGTTGAGACATCAACTG 787608 Query 78458 GTATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAA 78517 ||||| | || | ||||| || ||| || || ||||| || | ||| | ||||| Sbjct 787607 ATATGTCTTGATGACAGATTCAATATCCTCTTTGTGGATTCCAACAGATACTCTCATCAG 787548 Query 78518 CATATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAA 78577 ||| || || || ||||| || |||| | || || || | ||| || |||| | Sbjct 787547 CATGTGTTGTGGCCTTTCTACAATCTTTCCCTGAATCTTTAAGAGGTAAGACCTTTCAAG 787488 Query 78578 AGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625 ||||| |||||||| || | || ||||||||| ||||| || || Sbjct 787487 GGTTTTGAAACCAAAGTAATCATAGTCAAAGTCTCTGTCGTATATGAT 787440 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694539817370560